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Job DescriptionP39831
Confidence100.00%DateThu Jan 5 12:00:56 GMT 2012
Rank106Aligned Residues228
% Identity21%Templated2a4ka1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNN
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Template Sequence  TILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHF
Template Known Secondary structure  STTSTT
S
T

SS

TTSS


G
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   8.10.........20.........30.........40.........50.........60.........70.........80.......
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  AGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNL
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Template Sequence  AGVAHSALPLEAWEK. . . . . . . . VLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAFGLAHYAAGKLGVVGLARTL
Template Known Secondary structure  GGGTTTT

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TT



TT


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   88.90.........100.. .......110.........120.........130.........140.........150.........
 
   162.......170.........180.........190.........200.........210.........220.. .......230.........240
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Query Sequence  RTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVSTL. PAHVNINTLEMMPVTQSY
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Template Sequence  ALELARKGVRVNVLLPGLIQTPMTAG. LPPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQALYV. . . DGGR
Template Known Secondary structure  TTTT

SB

GGGTT.S
TSTT
S
B
SGGGTT

S
...STTT
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   164.....170.........180......... 190.........200.........210.........220.........230..... ....
 
   241
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Query Sequence  A
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Template Sequence  S
Template Known Secondary structure  T
Template Predicted Secondary structure 
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   240
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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