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Job DescriptionP39831
Confidence99.39%DateThu Jan 5 12:00:56 GMT 2012
Rank212Aligned Residues222
% Identity18%Templated1y1pa1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.... .....50.........60.........70......
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Query Sequence  IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL. . . . . GDNLYIAQLDVRNRAAIEEMLASLPAEWCNID
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Template Sequence  LVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAHIAS
Template Known Secondary structure  TTTSTT
SSSTTT
S
TTSTTTTTTTTTT
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   14.....20.........30.........40.........50.........60.........70.........80.........90...
 
   77..80.........90.........100.........110.........120.........130.... .....140...
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Query Sequence  ILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGS. . . . . . . . . . . . . TAGSWPYAG
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Template Sequence  VVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKS
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   94.....100.........110.........120.........130.........140.........150.........160.........170...
 
   144.....150.........160.........170.........180.........190.........200......... 210.
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Query Sequence  GNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTP. . . . . . . . . . . . ED
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Template Sequence  LWVYAASKTEAELAAWKFMDENKPH. FTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSAVD
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   174.....180.........190........ .200.........210.........220.........230.........240.........250..
 
   212.......220....
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Query Sequence  VSEAVWWVSTLPA
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Template Sequence  IGLLHLGCLVLPQ
Template Known Secondary structure 
TT
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   253......260.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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