Return to main results Retrieve Phyre Job Id

Job DescriptionP39831
Confidence100.00%DateThu Jan 5 12:00:56 GMT 2012
Rank91Aligned Residues239
% Identity19%Templated1vl8a_
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution2.07

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.... .....50.........60.........70.......
Predicted Secondary structure 









....

















Query SS confidence 










































. . . .
































Query Sequence  IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL. . . . GDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDI
Query Conservation 







 


 


  

  
  


  
            ....         
                       
Alig confidence 










































....
































Template Conservation 







 


 
 
  
   

 
    
           
             
                       
Template Sequence  VALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDT
Template Known Secondary structure  TTTSTT
S





TT
S


Template Predicted Secondary structure 



































Template SS confidence 















































































   11........20.........30.........40.........50.........60.........70.........80.........90
 
   78.80.........90.........100.........110.........120.........130.........140.........150.......
Predicted Secondary structure 


















































Query SS confidence 















































































Query Sequence  LVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQF
Query Conservation                                                          
            
  

 

   
Alig confidence 















































































Template Conservation                                                         
               

       
Template Sequence  VVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASL
Template Known Secondary structure 








GGG

TTT
SS


GGGT


SSS
Template Predicted Secondary structure 























































Template SS confidence 















































































   91........100.........110.........120.........130.........140.........150.........160.........170
 
   158.160.........170.........180.........190.... .....200.........210.........220.. .......230.....
Predicted Secondary structure 






















.










.



Query SS confidence 




































.



























.












Query Sequence  SLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDD. GKAEKTYQNTVALTPEDVSEAVWWVSTL. PAHVNINTLEMMP
Query Conservation      
      




 
 

 
 
            .              
 


  
 

 
 .   


  
 
 
Alig confidence 




































.



























.










..
Template Conservation      
       
 
    

   
                    
  
   




  
 

 
     


  
 
..
Template Sequence  TKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVTGQIIFV. .
Template Known Secondary structure  GGGT


B
STTTT
T
TTSS
B
GGGGSGGGTT

S
..
Template Predicted Secondary structure 








































..
Template SS confidence 















































































   171........180.........190.........200.........210.........220.........230.........240........
 
   236...240...
Predicted Secondary structure 




Query SS confidence 







Query Sequence  VTQSYAGL
Query Conservation     
    
Alig confidence  .






Template Conservation  .


 

 
Template Sequence  . DGGWTAN
Template Known Secondary structure  .STTGGG
Template Predicted Secondary structure  .






Template SS confidence 







   249250.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions