Return to main results Retrieve Phyre Job Id

Job DescriptionP39831
Confidence100.00%DateThu Jan 5 12:00:56 GMT 2012
Rank14Aligned Residues237
% Identity24%Templated1k2wa_
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNN
Query Conservation 







 


 


  

  
  


  
                     
                           
Alig confidence 















































































Template Conservation   






 


 


  
   

 


  
           
         
                           
Template Sequence  TALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDILVNN
Template Known Secondary structure  T
SSTTS

TT

TT
S



Template Predicted Secondary structure 








































Template SS confidence 















































































   7..10.........20.........30.........40.........50.........60.........70.........80......
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
Predicted Secondary structure 
















































Query SS confidence 















































































Query Sequence  AGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNL
Query Conservation                                                      
            
  

 

       
Alig confidence 















































































Template Conservation                                                      
            
  

          
Template Sequence  AALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSA
Template Known Secondary structure 







GGG

TTS


GGGTS

TT
Template Predicted Secondary structure 














































Template SS confidence 















































































   87..90.........100.........110.........120.........130.........140.........150.........160......
 
   162.......170.........180...... ...190.........200.........210.........220.. .......230
Predicted Secondary structure 
















..........
















.



Query SS confidence 
























. . . . . . . . . .



































.







Query Sequence  RTDLHGTAVRVTDIEPGLVGGTEFS. . . . . . . . . . NVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVSTL. PAHVNINT
Query Conservation 
      




 
 

 
 
    ..........                      
 


  
 

 
 .   


  
Alig confidence 
























..........



































.







Template Conservation 
       
 

 
 

 
 
                             

 
   
 


  
 

 
  
  


  
Template Sequence  GLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLATPEADYIVAQT
Template Known Secondary structure  GGGT

B

TTT

TTSTTSS
B
TTSGGGTT

S
Template Predicted Secondary structure 



































Template SS confidence 















































































   167..170.........180.........190.........200.........210.........220.........230.........240......
 
   231........240.
Predicted Secondary structure 


Query SS confidence 










Query Sequence  LEMMPVTQSYA
Query Conservation 
 
 
   
  
Alig confidence 


...




Template Conservation 
 
...


  
Template Sequence  YNV. . . DGGNW
Template Known Secondary structure  ...STTSS
Template Predicted Secondary structure  ...




Template SS confidence 










   247.. 250....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions