Return to main results Retrieve Phyre Job Id

Job DescriptionP39831
Confidence100.00%DateThu Jan 5 12:00:56 GMT 2012
Rank75Aligned Residues234
% Identity18%Templated1ja9a_
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution1.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30... ......40.... .....50.........60.........70.......
Predicted Secondary structure 








.
...

















Query SS confidence 































.










. . .
































Query Sequence  IVLVTGATAGFGECITRRFIQQGHKVIATGRR. QERLQELKDEL. . . GDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDI
Query Conservation 







 


 


  

  
  


  
 .           ...         
                       
Alig confidence 































.










...
































Template Conservation    





 


 
 
  
   

 


                            
                       
Template Sequence  VALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDF
Template Known Secondary structure  TTTTSTT
SS
TT



TTSS
Template Predicted Secondary structure 










































Template SS confidence 















































































   31........40.........50.........60.........70.........80.........90.........100.........110
 
   78.80.........90.........100.........110.........120.........130.........140.........150.......
Predicted Secondary structure 


















































Query SS confidence 















































































Query Sequence  LVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQF
Query Conservation                                                          
            
  

 

   
Alig confidence 




























..
















































Template Conservation                               ..                                      
  

      
Template Sequence  VMSNSGMEVWCDELEVTQELFDKVFNLNT. . RGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGF
Template Known Secondary structure 









GGG

T..

GGGT

S

S
Template Predicted Secondary structure 




























..




















Template SS confidence 















































































   111........120.........130......... 140.........150.........160.........170.........180........
 
   158.160.........170.........180.........190 .........200.........210.........220.. ..
Predicted Secondary structure 



















............













.

Query SS confidence 
































. . . . . . . . . . . .































.

Query Sequence  SLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRF. . . . . . . . . . . . KGDDGKAEKTYQNTVALTPEDVSEAVWWVSTL. PA
Query Conservation      
      




 
 

 
 
        ............                  
 


  
 

 
 .  
Alig confidence 
































............































.

Template Conservation      
 
     
 

 
 

 
 
                               



   




  
 

 
  
 
Template Sequence  CRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALCQEESE
Template Known Secondary structure  GGGT


BSSGGGTSTT

TT

TSTTSS
B
SGGGT
Template Predicted Secondary structure 

































Template SS confidence 















































































   189190.........200.........210.........220.........230.........240.........250.........260........
 
   225....230.........240
Predicted Secondary structure 




Query SS confidence 















Query Sequence  HVNINTLEMMPVTQSY
Query Conservation   


  
 
 
   
 
Alig confidence 








...



Template Conservation   


  
 
...


 
Template Sequence  WINGQVIKL. . . TGGG
Template Known Secondary structure  T

S
...STT
Template Predicted Secondary structure 




...



Template SS confidence 















   269270....... ..280.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions