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Job DescriptionP39831
Confidence100.00%DateThu Jan 5 12:00:56 GMT 2012
Rank29Aligned Residues239
% Identity24%Templatec3sjuA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:keto reductase; PDBTitle: hedamycin polyketide ketoreductase bound to nadph
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL. . . GDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDIL
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Template Sequence  TAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGIL
Template Known Secondary structure  STTSTT
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Query Sequence  VNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVL. PGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQF
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Template Sequence  VNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGF
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Query Sequence  SLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRF. . . . . . . . . . KGDDGKAEKTYQNTVALTPEDVSEAVWWVSTL. PAHV
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Template Sequence  TKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYLVTDAAASI
Template Known Secondary structure  TGGGTSSB
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   166...170.........180.........190.........200.........210.........220.........230.........240.....
 
   227..230.........240...
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Query Sequence  NINTLEMMPVTQSYAGL
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Template Sequence  TAQALNV. . . CGGLGNY
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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