Job Description P39831 Confidence 99.94% Date Thu Jan 5 12:00:56 GMT 2012 Rank 196 Aligned Residues 231 % Identity 17% Template c3rd5A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:mypaa.01249.c; PDBTitle: crystal structure of a putative uncharacterized protein from2 mycobacterium paratuberculosis Resolution 1.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	L	V	T	G	A	T	A	G	F	G	E	C	I	T	R	R	F	I	Q	Q	G	H	K	V	I	A	T	G	R	R	Q	E	R	L	Q	E	L	K	D	E	L	G	D	N	L	Y	I	A	Q	L	D	V	R	N	R	A	A	I	E	E	M	L	A	S	L	P	A	E	W	C	N	I	D	I	L	V	N	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	V	V	I	T	G	A	N	S	G	L	G	A	V	T	A	R	E	L	A	R	R	G	A	T	V	I	M	A	V	R	D	T	R	K	G	E	A	A	A	R	T	M	A	G	Q	V	E	V	R	E	L	D	L	Q	D	L	S	S	V	R	R	F	A	D	G	V	S	G	A	D	V	L	I	N	N	A	G	I	M
Template Known Secondary structure									S	S													T	T								S										T	T	S	S	S									T	T											T
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		A	G	L	A	L	G	M	E	P	A	H	K	A	S	V	E	D	.	.	W	E	T	M	I	D	T	N	N	K	G	L	V	Y	M	T	R	A	V	L	P	G	M	V	E	R	N	H	G	H	I	I	N	I	G	S	T	A	G	S	W	P	Y	A	G	G	N	V	Y	G	A	T	K	A	F	V	R	Q	F	S	L
Query Conservation																			.	.
Alig confidence																			.	.
Template Conservation
Template Sequence		A	V	P	Y	A	L	T	V	D	G	F	E	S	Q	I	G	T	N	H	L	G	H	F	A	L	T	N	L	L	L	P	R	L	T	D	R	V	V	T	V	S	S	M	A	H	W	P	G	R	I	N	L	E	D	L	N	W	R	S	R	R	Y	S	P	W	L	A	Y	S	Q	S	K	L	A	N	L	L	F	T	S
Template Known Secondary structure		S					B		T	T	S		B							T											G	G	G											G	G	G	T	T					S	S		T	T		S	S	S
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.																				.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	L	R	T	D	L	H	G	T	A	V	.	.	R	V	T	D	I	E	P	G	L	V	G	G	T	E	F	S	N	V	R	F	K	G	D	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	E	K	T	Y	Q	N	T	V	A	L	T	P	E	D	V	S	E	A	V	W	W
Query Conservation													.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	L	Q	R	R	L	T	A	A	G	S	P	L	R	A	L	A	A	H	P	G	Y	S	H	T	N	L	A	T	D	A	D	F	G	A	R	Q	T	L	Y	A	A	S	Q	D	L	P	G	D	S	F	V	G	P	R	F	G	Y	L	G	R	T	Q	P	V	G	R	S	R	R	A	K	D	A	G	M	A	A	A	L
Template Known Secondary structure										T	T											S	G	G	G	S																			S				T	T						T	T	S	S	S	S									T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	T	L	P	A	H	V	N	I	N	T	L	E	M
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		W	A	.	L	S	E	Q	L	T	K	T	E	F	P	L
Template Known Secondary structure				.							T
Template Predicted Secondary structure				.
Template SS confidence
		276	.		.	.	280	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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