Job Description P39831 Confidence 98.78% Date Thu Jan 5 12:00:56 GMT 2012 Rank 264 Aligned Residues 195 % Identity 10% Template c3r6dA_ PDB info PDB header:lyase, isomerase Chain: A: PDB Molecule:nad-dependent epimerase/dehydratase; PDBTitle: crystal structure of nad-dependent epimerase/dehydratase from2 veillonella parvula dsm 2008 with cz-methylated lysine Resolution 1.25 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	V	T	G	A	T	A	G	F	G	E	C	I	T	R	R	F	I	Q	Q	G	H	K	V	I	A	T	G	R	R	Q	E	R	L	Q	E	L	K	D	E	L	G	D	N	L	Y	I	A	Q	L	D	V	R	N	R	A	A	I	E	E	M	L	A	S	L	P	A	E	W	C	N	I	D	I	L	V	N	N	A
Query Conservation
Alig confidence																																																											.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.
Template Sequence		I	T	I	L	G	A	A	G	Q	I	A	Q	L	T	A	T	L	L	T	Y	T	D	X	H	I	T	L	Y	G	R	Q	L	K	T	R	I	P	P	E	I	I	D	H	E	R	V	T	V	I	E	G	S	F	Q	N	P	G	.	.	.	.	.	.	.	.	L	E	Q	A	V	T	N	A	E	V	V	F	V	G	A
Template Known Secondary structure						S	T	T	S	T	T	T																			S	S					S						T	S	T	T								T	T				.	.	.	.	.	.	.	.						T	T		S					S
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.									.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	A	L	G	M	E	P	A	H	K	A	S	V	E	D	W	E	T	M	I	D	T	N	N	K	G	L	V	Y	M	T	R	A	V	L	P	G	M	V	E	R	N	H	G	H	I	I	N	I	G	S	T	A	G	S	W	P	Y	A	G	G	N	V	Y	G	A	T	K	A	F	V	R	Q	F	S	L	N	L	R
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Template Sequence		X	E	S	G	S	D	X	A	S	I	V	K	A	L	S	R	N	I	R	R	V	I	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	X	A	G	L	S	G	E	F	P	V	A	L	E	K	W	T	F	D	N	L	P	I	S	Y	V	Q	G	E	R	Q	A	R	N	V	L	R	E	S	.
Template Known Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	T	T	S		S											T	S																		S	.
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.																	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.			.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																																																													.	.
Query SS confidence																																																													.	.
Query Sequence		T	D	L	H	G	T	A	V	R	V	T	D	I	E	P	G	L	V	G	G	T	E	F	S	N	V	R	F	K	G	D	D	G	K	A	E	K	T	Y	Q	N	T	V	A	L	T	P	E	D	V	S	E	A	V	W	W	V	S	T	.	.	L	P	A	H	V	N	I	N	T	L	E	M
Query Conservation																																																													.	.
Alig confidence		.	.	.	.	.	.																												.	.	.	.	.																						.	.
Template Conservation		.	.	.	.	.	.																												.	.	.	.	.
Template Sequence		.	.	.	.	.	.	N	L	N	Y	T	I	L	R	L	T	W	L	Y	N	D	P	E	T	D	Y	E	L	I	P	E	G	A	.	.	.	.	.	Q	F	N	D	A	Q	V	S	R	E	A	V	V	K	A	I	F	D	I	L	H	A	A	D	E	T	P	F	H	R	T	S	I	G	V
Template Known Secondary structure		.	.	.	.	.	.		S																							T	T	S	.	.	.	.	.																					T		S			G	G	G	T	T
Template Predicted Secondary structure		.	.	.	.	.	.																												.	.	.	.	.
Template SS confidence
								143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.						170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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