Job Description P39831 Confidence 100.00% Date Thu Jan 5 12:00:56 GMT 2012 Rank 139 Aligned Residues 215 % Identity 23% Template c3qljB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:short chain dehydrogenase; PDBTitle: crystal structure of a short chain dehydrogenase from mycobacterium2 avium Resolution 1.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.														.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	V	L	V	T	G	A	T	A	G	F	G	E	C	I	T	R	R	F	I	Q	Q	G	H	K	V	I	A	T	G	R	R	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	L	Q	E	L	K	D	E	L	G	D	N	L	Y	I	A	Q	L	D	V	R	N	R	A	A	I	E	E	M	L	A	S	L
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	I	V	T	G	A	G	G	G	I	G	R	A	H	A	L	A	F	A	A	E	G	A	R	V	V	V	N	D	I	G	V	G	L	D	G	S	P	A	S	G	G	S	A	A	Q	S	V	V	D	E	I	T	A	A	G	G	E	A	V	A	D	G	S	N	V	A	D	W	D	Q	A	A	G	L	I	Q	T	A
Template Known Secondary structure						T	T	T	T	S													T	T										B		T	T	S	S	B	T		T	T	S												T	T										T	T	S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110						.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																																												.	.	.	.	.
Query SS confidence																																												.	.	.	.	.
Query Sequence		P	A	E	W	C	N	I	D	I	L	V	N	N	A	G	L	A	L	G	M	E	P	A	H	K	A	S	V	E	D	W	E	T	M	I	D	T	N	N	K	G	L	.	.	.	.	.	V	Y	M	T	R	A	V	L	P	G	M	V	E	R	N	H	G	H	I	I	N	I	G	S	T	A	G	S	W	P	Y	A	G
Query Conservation																																												.	.	.	.	.
Alig confidence																																												.	.	.	.	.
Template Conservation
Template Sequence		V	E	T	F	G	G	L	D	V	L	V	N	N	A	G	I	V	R	D	R	M	I	A	N	T	S	E	E	E	F	D	A	V	I	A	V	H	L	K	G	H	F	A	T	M	R	H	A	A	A	Y	W	R	G	L	S	K	A	G	K	A	V	D	G	R	I	I	N	T	S	S	G	A	G	L	Q	G	S	V	G
Template Known Secondary structure						S															B		G	G	G																																		T	T																			B	T	T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		G	N	V	Y	G	A	T	K	A	F	V	R	Q	F	S	L	N	L	R	T	D	L	H	G	T	A	V	R	V	T	D	I	E	P	G	L	V	G	G	T	E	F	S	N	V	R	F	K	G	D	D	G	K	A	E	K	T	Y	Q	N	T	V	A	L	T	P	E	D	V	S	E	A	V	W	W	V	S	T	L	.
Query Conservation																																																																																	.
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	G	N	Y	S	A	A	K	A	G	I	A	T	L	T	L	V	G	A	A	E	M	G	R	Y	G	V	T	V	N	A	I	A	P	S	A	R	T	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	D	A	M	A	P	E	N	V	S	P	L	V	V	W	L	G	S	A	E
Template Known Secondary structure		B																						G	G	G	T										T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T		G	G	G	T								T	S	G	G
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.																						.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	H	V	N	I	N	T	L	E	M	M	P	V	T	Q	S	Y
Query Conservation
Alig confidence													.	.	.
Template Conservation													.	.	.
Template Sequence		A	R	D	V	T	G	K	V	F	E	V	.	.	.	E	G	G	K
Template Known Secondary structure		G	T	T			S						.	.	.		T	T
Template Predicted Secondary structure													.	.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.				.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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