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Job DescriptionP39831
Confidence100.00%DateThu Jan 5 12:00:56 GMT 2012
Rank67Aligned Residues235
% Identity22%Templatec3osuA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] reductase; PDBTitle: crystal structure of the 3-oxoacyl-acyl carrier protein reductase,2 fabg, from staphylococcus aureus
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  IVLVTGATAGFGECITRRFIQQGHKVIATG. RRQERLQELKDEL. . . GDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDI
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Template Sequence  SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAXIKEVVSQFGSLDV
Template Known Secondary structure  TT
SSTT
SS
TTS


TT
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   78.80.........90.........100.........110.........120.........130.........140.........150.......
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Query Sequence  LVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQF
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Template Sequence  LVNNAGITR. DNLLXRXKEQEWDDVIDTNLKGVFNCIQKATPQXLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGL
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   86...90.... .....100.........110.........120.........130.........140.........150.........160....
 
   158.160.........170.........180.........190.........200.........210.........220.. .......230......
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Query Sequence  SLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVSTL. PAHVNINTLEMMPV
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Template Sequence  TKSAARELASRGITVNAVAPGFIVSDXTDA. LSDELKEQXLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHV. . .
Template Known Secondary structure  GGGT
SBGGG

S
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TT
TT
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B
TSGGGTT

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   165....170.........180.........190.... .....200.........210.........220.........230.........240
 
   237..240.
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Query Sequence  TQSYA
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Template Sequence  NGGXY
Template Known Secondary structure  STTS
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   241....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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