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Job DescriptionP39831
Confidence100.00%DateThu Jan 5 12:00:56 GMT 2012
Rank7Aligned Residues239
% Identity20%Templatec3nugA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:3-oxoacyl-(acyl-carrier protein) reductase; PDBTitle: crystal structure of wild type tetrameric pyridoxal 4-dehydrogenase2 from mesorhizobium loti
Resolution1.79 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNN
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Template Sequence  TALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDILVNN
Template Known Secondary structure  TTTTSTT


SS
TT




TT
S

S
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   910.........20.........30.........40.........50.........60.........70.........80........
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  AGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNL
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Template Sequence  ASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRAL
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GGG

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   8990.........100.........110.........120.........130.........140.........150.........160........
 
   162.......170.........180.........190.........200.........210.........220.. .......230.........240
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Query Sequence  RTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVSTL. PAHVNINTLEMMPVTQSY
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Template Sequence  ATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIADVVSFLASDDARWITGQTLNV. . . DAGM
Template Known Secondary structure  GGGT
SB

TSGGGGGSSS
S
B
SGGGTT

S
...STTS
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   169170.........180.........190.........200.........210.........220.........230.........240. ....
 
   241..
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Query Sequence  AGL
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Template Sequence  VRH
Template Known Secondary structure  S

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   246..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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