Job Description P39831 Confidence 98.59% Date Thu Jan 5 12:00:56 GMT 2012 Rank 286 Aligned Residues 188 % Identity 12% Template c3iusB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized conserved protein; PDBTitle: the structure of a functionally unknown conserved protein2 from silicibacter pomeroyi dss Resolution 1.66 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	V	T	G	A	T	A	G	F	G	E	C	I	T	R	R	F	I	Q	Q	G	H	K	V	I	A	T	G	R	R	Q	E	R	L	Q	E	L	K	D	E	L	G	D	N	L	Y	I	A	Q	L	D	V	R	N	R	A	A	I	E	E	M	L	A	S	L	P	A	E	W	C	N	I	D	I	L	V	N	N	A
Query Conservation
Alig confidence								.																																				.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.																																				.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	S	F	G	H	.	G	Y	T	A	R	V	L	S	R	A	L	A	P	Q	G	W	R	I	I	G	T	S	R	N	P	D	Q	X	E	A	I	R	A	S	G	.	.	.	A	E	P	L	L	W	P	G	E	E	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D
Template Known Secondary structure						T		.												G	G	G	T								S		G	G	G							T	T	.	.	.	S					T	T	T	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T
Template Predicted Secondary structure								.																																				.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.				.	.	.	.	50	.	.	.	.	.	.	.																						.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	A	L	G	M	E	P	A	H	K	A	S	V	E	D	W	E	T	M	I	D	T	N	N	K	G	L	V	Y	M	T	R	A	V	L	P	G	M	V	E	R	N	H	G	H	I	I	N	I	G	S	T	A	G	S	W	P	Y	A	G	G	N	V	Y	G	A	T	K	A	F	V	R	Q	F	S	L	N	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	T	H	L	L	I	S	T	A	P	D	S	G	G	D	P	V	L	A	A	L	G	D	Q	I	A	A	R	A	A	Q	F	R	W	V	G	Y	L	S	T	T	A	V	Y	G	D	H	D	G	A	W	V	D	E	T	T	P	L	T	P	T	A	A	R	G	R	W	R	V	X	A	E	Q	Q	W	Q	A	V	P
Template Known Secondary structure		T											B	T	T	B														T	G	G	G		S								G	G	G	S				T	T					T	T	S						S															T	S	T
Template Predicted Secondary structure
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	L	H	G	T	A	V	R	V	T	D	I	E	P	G	L	V	G	G	T	E	F	S	N	V	R	F	K	G	D	D	G	K	A	E	K	T	Y	Q	N	T	V	A	L	T	P	E	D	V	S	E	A	V	W	W	V	S	T	L	P	A
Query Conservation
Alig confidence		.	.	.	.	.	.																	.	.	.
Template Conservation		.	.	.	.	.	.																	.	.	.
Template Sequence		.	.	.	.	.	.	N	L	P	L	H	V	F	R	L	A	G	I	Y	G	P	G	.	.	.	R	G	P	F	G	G	I	R	R	I	I	K	P	G	Q	V	F	S	R	I	H	V	E	D	I	A	Q	V	L	A	A	S	X	A	R	P	D
Template Known Secondary structure		.	.	.	.	.	.	T													B	T	T	.	.	.	B	S											T	T			B																		S
Template Predicted Secondary structure		.	.	.	.	.	.																	.	.	.
Template SS confidence
								140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.				.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions