Job Description P39831 Confidence 100.00% Date Thu Jan 5 12:00:56 GMT 2012 Rank 128 Aligned Residues 231 % Identity 24% Template c3ioyB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:short-chain dehydrogenase/reductase sdr; PDBTitle: structure of putative short-chain dehydrogenase (saro_0793)2 from novosphingobium aromaticivorans Resolution 1.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.					.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.
Query SS confidence																																													.	.	.	.
Query Sequence		I	V	L	V	T	G	A	T	A	G	F	G	E	C	I	T	R	R	F	I	Q	Q	G	H	K	V	I	A	T	G	R	R	Q	E	R	L	Q	E	L	K	D	E	L	.	.	.	.	G	D	N	L	Y	I	A	Q	L	D	V	R	N	R	A	A	I	E	E	M	L	A	S	L	P	A	E	W	C	N	I	D	I
Query Conservation																																													.	.	.	.
Alig confidence																																													.	.	.	.
Template Conservation
Template Sequence		T	A	F	V	T	G	G	A	N	G	V	G	I	G	L	V	R	Q	L	L	N	Q	G	C	K	V	A	I	A	D	I	R	Q	D	S	I	D	K	A	L	A	T	L	E	A	E	S	G	P	E	V	M	G	V	Q	L	D	V	A	S	R	E	G	F	K	M	A	A	D	E	V	E	A	R	F	G	P	V	S	I
Template Known Secondary structure							T	T	T	S	T											T	T	T								S														T				T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.						.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																															.	.	.	.	.
Query SS confidence																																															.	.	.	.	.
Query Sequence		L	V	N	N	A	G	L	A	L	G	M	E	P	A	H	K	A	S	V	E	D	W	E	T	M	I	D	T	N	N	K	G	L	V	Y	M	T	R	A	V	L	P	G	M	V	.	.	.	.	.	E	R	N	H	G	H	I	I	N	I	G	S	T	A	G	S	W	P	Y	A	G	G	N	V	Y	G	A	T	K	A
Query Conservation																																															.	.	.	.	.
Alig confidence																																															.	.	.	.	.
Template Conservation
Template Sequence		L	C	N	N	A	G	V	N	L	F	Q	P	I	E	E	S	S	Y	D	D	W	D	W	L	L	G	V	N	L	H	G	V	V	N	G	V	T	T	F	V	P	R	M	V	E	R	V	K	A	G	E	Q	K	G	G	H	V	V	N	T	A	S	M	A	A	F	L	A	A	G	S	P	G	I	Y	N	T	T	K	F
Template Known Secondary structure														G	G	G														T																				T	T	S												G	G	G	T				S	T	T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.					200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.																								.
Query SS confidence																																																	.	.	.	.																								.
Query Sequence		F	V	R	Q	F	S	L	N	L	R	T	D	L	H	G	T	A	V	R	V	T	D	I	E	P	G	L	V	G	G	T	E	F	S	N	V	R	F	K	G	D	D	G	K	A	E	K	.	.	.	.	T	Y	Q	N	T	V	A	L	T	P	E	D	V	S	E	A	V	W	W	V	S	T	L	.	P	A	H	V	N
Query Conservation																																																	.	.	.	.																								.
Alig confidence																																																	.	.	.	.																								.				.	.
Template Conservation																																																																																.	.
Template Sequence		A	V	R	G	L	S	E	S	L	H	Y	S	L	L	K	Y	E	I	G	V	S	V	L	C	P	G	L	V	K	H	E	F	G	M	E	P	D	V	I	G	A	R	V	I	E	A	M	K	A	N	R	L	H	I	F	S	H	P	D	H	K	E	E	L	R	E	V	F	D	E	I	I	A	E	Y	Q	D	Y	.	.
Template Known Secondary structure															G	G	G	T											B				S	S	B																T		S						G	G	G														T					.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	T	L	E	M	M	P	V	T	Q	S	Y	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	P	K	D	P	G	Y	D
Template Known Secondary structure		.	.	.	.	.	.	.				T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									279	280	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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