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Job DescriptionP39831
Confidence100.00%DateThu Jan 5 12:00:56 GMT 2012
Rank32Aligned Residues238
% Identity17%Templatec3ijrF_
PDB info PDB header:oxidoreductaseChain: F: PDB Molecule:oxidoreductase, short chain dehydrogenase/reductase family; PDBTitle: 2.05 angstrom resolution crystal structure of a short chain2 dehydrogenase from bacillus anthracis str. 'ames ancestor' in complex3 with nad+
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.... .....50.........60.........70.......
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Query Sequence  IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL. . . . GDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDI
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Template Sequence  NVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNI
Template Known Secondary structure  TTTSTT
SS
TTTS
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TTSS


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   46...50.........60.........70.........80.........90.........100.........110.........120.....
 
   78.80.........90.........100.........110.........120.........130.........140.........150.......
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Query Sequence  LVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQF
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Template Sequence  LVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSH. . LKQGDVIINTASIVAYEGNETLIDYSATKGAIVAF
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SSGGG

TTT..

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   126...130.........140.........150.........160........ .170.........180.........190.........200...
 
   158.160.........170.........180.........190.........200.........210.........220.. .......230......
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Query Sequence  SLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVSTL. PAHVNINTLEMMPV
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Template Sequence  TRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFGSNVPXQRPGQPYELAPAYVYLASSDSSYVTGQXIHV. . .
Template Known Secondary structure  GGGT

SB
STTTTTTS
TTTTTTSTTSS
B
GGGTSGGGTT

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   204.....210.........220.........230.........240.........250.........260.........270.........280
 
   237..240....
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Query Sequence  TQSYAGLN
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Template Sequence  NGGVIVNG
Template Known Secondary structure  SSS




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   281.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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