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Job DescriptionP39831
Confidence99.20%DateThu Jan 5 12:00:56 GMT 2012
Rank223Aligned Residues213
% Identity14%Templatec3h2sA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:putative nadh-flavin reductase; PDBTitle: crystal structure of the q03b84 protein from lactobacillus2 casei. northeast structural genomics consortium target3 lcr19.
Resolution1.78 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNA
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Template Sequence  IAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR. . . . . . . . . . . . LGATVATLVKEPLVLTEADLDSVDAVVDAL
Template Known Secondary structure  TTTSTT
S
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TTS

GGG

TT
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   3......10.........20.........30.........40 .........50.........60.........70
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  GLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLR
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Template Sequence  SVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILGSASLAXPGADHPXILDFPESAASQPWYDGALYQYYEYQFLQXN. .
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TTSS
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GGGSB
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GGGGGSTTTT
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   71........80.........90.........100.........110.........120.........130.........140........
 
   163......170.........180.........190.........200.........210.........220.........230........
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Query Sequence  TDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVSTLPAHVNINTLEMMPVTQ
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Template Sequence  . . . . . ANVNWIGISPSEAFPSGPATSYVAGKDTLLVGEDG. QSHITTGNXALAILDQLEHPTAIRDRIVVR. . . DA
Template Known Secondary structure  .....TTS

SB







SSB



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   149150.........160.........170.........180... ......190.........200.........210... ..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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