Return to main results Retrieve Phyre Job Id

Job DescriptionP39831
Confidence100.00%DateThu Jan 5 12:00:56 GMT 2012
Rank23Aligned Residues235
% Identity24%Templatec3gk3D_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:acetoacetyl-coa reductase; PDBTitle: crystal structure of acetoacetyl-coa reductase from2 burkholderia pseudomallei 1710b
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNN
Query Conservation 







 


 


  

  
  


  
                     
                           
Alig confidence 









































.




































Template Conservation   






 


 


  
   
  


  
           .                                     
Template Sequence  VAFVTGGMGGLGAAISRRLHDAGMAVAVSHSVSTWLMHERDA. GRDFKAYAVDVADFESCERCAEKVLADFGKVDVLINN
Template Known Secondary structure  TTTTSTT


.T




TT
S

S
Template Predicted Secondary structure 









.
































Template SS confidence 















































































   6...10.........20.........30.........40....... ..50.........60.........70.........80....
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
Predicted Secondary structure 
















































Query SS confidence 















































































Query Sequence  AGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNL
Query Conservation                                                      
            
  

 

       
Alig confidence 




.









































































Template Conservation       .                                         
   

            
  

 
       
Template Sequence  AGITR. DATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTL
Template Known Secondary structure 




.


TTT

TTT




TT
Template Predicted Secondary structure 




.
















































Template SS confidence 















































































   90.... .....100.........110.........120.........130.........140.........150.........160........
 
   162.......170.........180.........190.........200.........210.........220.. .......230.........240
Predicted Secondary structure 

































.






Query SS confidence 




























































.

















Query Sequence  RTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVSTL. PAHVNINTLEMMPVTQSY
Query Conservation 
      




 
 

 
 
                          
 


  
 

 
 .   


  
 
 
   
 
Alig confidence 




























































.










...



Template Conservation 
       
 

 
 

 
 
                   
  
   
 


  
  
 
  
  


  
 
...


 
Template Sequence  ALETAKRGITVNTVSPGYLATAMVEAVPQDVLEAKILPQIPVGRLGRPDEVAALIAFLCSDDAGFVTGADLAI. . . NGGM
Template Known Secondary structure  SGGGT

B

S
TGGG
TT
S
B
TSGGGTT

S
...STTS
Template Predicted Secondary structure 
































...


Template SS confidence 















































































   169170.........180.........190.........200.........210.........220.........230.........240. ....
 
   241
Predicted Secondary structure 
Query SS confidence 
Query Sequence  A
Query Conservation   
Alig confidence 
Template Conservation   
Template Sequence  H
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   246
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions