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Job DescriptionP39831
Confidence100.00%DateThu Jan 5 12:00:56 GMT 2012
Rank124Aligned Residues219
% Identity18%Templatec3gemC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:short chain dehydrogenase; PDBTitle: crystal structure of short-chain dehydrogenase from pseudomonas2 syringae
Resolution1.83 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNA
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Template Sequence  ILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAG. . AVALYGDFSCETGIXAFIDLLKTQTSSLRAVVHNA
Template Known Secondary structure  TTTTSTT

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   8.10.........20.........30.........40.........50 .........60.........70.........80.....
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  GLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLR
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Template Sequence  SEWLAE. . TPGEEADNFTRXFSVHXLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFA
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   86...90. ........100.........110.........120.........130.........140.........150.........160...
 
   163......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  TDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVSTLPAHVNINTLEMMPVTQSYA
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Template Sequence  ARFAP. LVKVNGIAPALAAYRA. . . . . . . . . . . NALAKSALGIEPGAEVIYQSLRYLLD. STYVTGTTLTV. . . NGGRH
Template Known Secondary structure  TT.TS


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   164.... .170.........180.... .....190.........200.........210 .........220. .....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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