Return to main results Retrieve Phyre Job Id

Job DescriptionP39831
Confidence100.00%DateThu Jan 5 12:00:56 GMT 2012
Rank130Aligned Residues219
% Identity20%Templatec3f9iB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] reductase; PDBTitle: crystal structure of 3-ketoacyl-(acyl-carrier-protein) reductase2 rickettsia prowazekii
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNN
Query Conservation 







 


 


  

  
  


  
                     
                           
Alig confidence 













































































..
Template Conservation   






 


 


  

  

 
    
                                               ..
Template Sequence  TSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILVCNAG. .
Template Known Secondary structure  TTTTSTT
S

SS

TT
T
SS




..
Template Predicted Secondary structure 








































..
Template SS confidence 















































































   8.10.........20.........30.........40.........50.........60.........70.........80.....
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
Predicted Secondary structure 
















































Query SS confidence 















































































Query Sequence  AGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNL
Query Conservation                                                      
            
  

 

       
Alig confidence  ...............
































































Template Conservation  ...............                                                     
           
Template Sequence  . . . . . . . . . . . . . . . ITDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIGNPGQANYCASKAGLIGMTKSL
Template Known Secondary structure  ...............


TT








S

Template Predicted Secondary structure  ...............





































Template SS confidence 















































































   86...90.........100.........110.........120.........130.........140.........150
 
   162.......170.........180.........190.........200.........210.........220.. .......230.........240
Predicted Secondary structure 

































.






Query SS confidence 




























































.

















Query Sequence  RTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVSTL. PAHVNINTLEMMPVTQSY
Query Conservation 
      




 
 

 
 
                          
 


  
 

 
 .   


  
 
 
   
 
Alig confidence 



























.































.










...



Template Conservation 
 
     
 
  
 

   
       .           
  
   
 


     
 
  
  


  
 
...


 
Template Sequence  SYEVATRGITVNAVAPGFIKSDMTDKLN. EKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNASYITGQTLHV. . . NGGM
Template Known Secondary structure  GGGT
SB

SS

S

.T
TTSS
B
SGGGTT

S
...STTS
Template Predicted Secondary structure 






















.















...


Template SS confidence 















































































   163......170.........180.........190 .........200.........210.........220.........230.... ....
 
   241
Predicted Secondary structure 
Query SS confidence 
Query Sequence  A
Query Conservation   
Alig confidence 
Template Conservation   
Template Sequence  L
Template Known Secondary structure  S
Template Predicted Secondary structure 
Template SS confidence 
   239
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions