Job Description P39831 Confidence 99.94% Date Thu Jan 5 12:00:56 GMT 2012 Rank 195 Aligned Residues 198 % Identity 16% Template c3d7lG_ PDB info PDB header:structural genomics, unknown function Chain: G: PDB Molecule:lin1944 protein; PDBTitle: the crystal structure of the protein lin1944 from listeria innocua . Resolution 2.06 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	V	L	V	T	G	A	T	A	G	F	G	E	C	I	T	R	R	F	I	Q	Q	G	H	K	V	I	A	T	G	R	R	Q	E	R	L	Q	E	L	K	D	E	L	G	D	N	L	Y	I	A	Q	L	D	V	R	N	R	A	A	I	E	E	M	L	A	S	L	P	A	E	W	C	N	I	D	I	L	V	N
Query Conservation
Alig confidence																										.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	K	I	L	L	I	G	A	S	G	T	L	G	S	A	V	K	E	R	L	E	K	K	A	.	E	V	I	T	A	G	R	H	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	T	V	D	I	T	N	I	D	S	I	K	K	X	Y	E	Q	V	G	K	V	D	A	I	V	S
Template Known Secondary structure								T	T	T	S											T	T	T	S	.							S	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S					T	T
Template Predicted Secondary structure																										.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.																			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	G	L	A	L	G	M	E	P	A	H	K	A	S	V	E	D	W	E	T	M	I	D	T	N	N	K	G	L	V	Y	M	T	R	A	V	L	P	G	M	V	E	R	N	H	G	H	I	I	N	I	G	S	T	A	G	S	W	P	Y	A	G	G	N	V	Y	G	A	T	K	A	F	V	R	Q	F	S	L	N
Query Conservation
Alig confidence								.																																			.	.
Template Conservation								.																																			.	.
Template Sequence		A	T	G	S	A	T	.	F	S	P	L	T	E	L	T	P	E	K	N	A	V	T	I	S	S	K	L	G	G	Q	I	N	L	V	L	L	G	I	D	S	L	.	.	N	D	K	G	S	F	T	L	T	T	G	I	X	X	E	D	P	I	V	Q	G	A	S	A	A	X	A	N	G	A	V	T	A	F	A	K	S
Template Known Secondary structure								.				G	G	G												T	T	T									T	T	G	G	G		.	.												G	G	G	T	S			T	T
Template Predicted Secondary structure								.																																			.	.
Template SS confidence
		62	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	T	D	L	H	G	T	A	V	R	V	T	D	I	E	P	G	L	V	G	G	T	E	F	S	N	V	R	F	K	G	D	D	G	K	A	E	K	T	Y	Q	N	T	V	A	L	T	P	E	D	V	S	E	A	V	W	W	V	S	T	L	P	A	H	V	N	I	N	T	L	E	M
Query Conservation
Alig confidence								.																		.	.	.	.	.	.	.	.	.	.																													.	.
Template Conservation								.																		.	.	.	.	.	.	.	.	.	.																													.	.
Template Sequence		A	A	I	E	X	P	.	R	G	I	R	I	N	T	V	S	P	N	V	L	E	E	S	W	.	.	.	.	.	.	.	.	.	.	D	K	L	E	P	F	F	E	G	F	L	P	V	P	A	A	K	V	A	R	A	F	E	K	S	V	F	G	.	.	A	Q	T	G	E	S	Y	Q	V
Template Known Secondary structure			G	G	G		S	.	T	T											B	G	G	G		.	.	.	.	.	.	.	.	.	.				G	G	G	S	T	T				B															S	.	.				S
Template Predicted Secondary structure								.																		.	.	.	.	.	.	.	.	.	.																													.	.
Template SS confidence
		139	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.											.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions