Job Description P39831 Confidence 100.00% Date Thu Jan 5 12:00:56 GMT 2012 Rank 118 Aligned Residues 239 % Identity 18% Template c2wdzD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:short-chain dehydrogenase/reductase; PDBTitle: crystal structure of the short chain dehydrogenase2 galactitol-dehydrogenase (gatdh) of rhodobacter3 sphaeroides in complex with nad+ and 1,2-pentandiol Resolution 1.95 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		I	V	L	V	T	G	A	T	A	G	F	G	E	C	I	T	R	R	F	I	Q	Q	G	H	K	V	I	A	T	G	R	R	Q	E	R	L	Q	E	L	K	D	E	L	G	D	N	L	Y	.	I	A	Q	L	D	V	R	N	R	A	A	I	E	E	M	L	A	S	L	P	A	E	W	C	N	I	D	I	L	V	N
Query Conservation																																																		.
Alig confidence																																																		.
Template Conservation
Template Sequence		C	A	A	V	T	G	A	G	S	G	I	G	L	E	I	C	R	A	F	A	A	S	G	A	R	L	I	L	I	D	R	E	A	A	A	L	D	R	A	A	Q	E	L	G	A	A	V	A	A	R	I	V	A	D	V	T	D	A	E	A	M	T	A	A	A	A	E	A	E	A	V	A	P	V	S	I	L	V	N	S
Template Known Secondary structure							T	T	T	S													T	T								S													G	G	G									T	T																S
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	G	L	A	L	G	M	E	P	A	H	K	A	S	V	E	D	W	E	T	M	I	D	T	N	N	K	G	L	V	Y	M	T	R	A	V	L	P	G	M	V	E	R	N	H	G	H	I	I	N	I	G	S	T	A	G	S	W	P	Y	A	G	G	N	V	Y	G	A	T	K	A	F	V	R	Q	F	S	L	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	I	A	R	L	H	D	A	L	E	T	D	D	A	T	W	R	Q	V	M	A	V	N	V	D	G	M	F	W	A	S	R	A	F	G	R	A	M	V	A	R	G	A	G	A	I	V	N	L	G	S	M	S	G	T	I	V	N	R	P	Q	F	A	S	S	Y	M	A	S	K	G	A	V	H	Q	L	T	R	A
Template Known Secondary structure								B		G	G	G														T																	T	T										G	G	G	T	S			S	S	S		B
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.																													.
Query SS confidence																																				.																													.
Query Sequence		L	R	T	D	L	H	G	T	A	V	R	V	T	D	I	E	P	G	L	V	G	G	T	E	F	S	N	V	R	F	K	G	D	D	.	G	K	A	E	K	T	Y	Q	N	T	V	A	L	T	P	E	D	V	S	E	A	V	W	W	V	S	T	L	.	P	A	H	V	N	I	N	T	L	E	M	M	P	V	T	Q
Query Conservation																																				.																													.
Alig confidence																																				.																													.												.	.	.
Template Conservation																																																																													.	.	.
Template Sequence		L	A	A	E	W	A	G	R	G	V	R	V	N	A	L	A	P	G	Y	V	A	T	E	M	T	L	K	M	R	E	R	P	E	L	F	E	T	W	L	D	M	T	P	M	G	R	C	G	E	P	S	E	I	A	A	A	A	L	F	L	A	S	P	A	A	S	Y	V	T	G	A	I	L	A	V	.	.	.	D	G
Template Known Secondary structure								T	T	T											B	S	S	G	G	G					T	S										T		T	T		S		B														S	G	G	G	T	T			S						.	.	.	S	T
Template Predicted Secondary structure																																																																													.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.				.	.
		239	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Y	A	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	Y	T	V	W
Template Known Secondary structure		T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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