Job Description P39831 Confidence 99.52% Date Thu Jan 5 12:00:56 GMT 2012 Rank 209 Aligned Residues 210 % Identity 14% Template c2uv8C_ PDB info PDB header:transferase Chain: C: PDB Molecule:fatty acid synthase subunit alpha (fas2); PDBTitle: crystal structure of yeast fatty acid synthase with stalled2 acyl carrier protein at 3.1 angstrom resolution Resolution 3.10 Å

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		2	.	.	.	.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.								.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure								.																			.																				.	.	.	.	.	.	.
Query SS confidence								.																			.																				.	.	.	.	.	.	.
Query Sequence		I	V	L	V	T	G	.	A	T	A	G	F	G	E	C	I	T	R	R	F	I	Q	Q	G	H	.	K	V	I	A	T	G	R	R	Q	E	R	L	Q	E	L	K	D	E	L	.	.	.	.	.	.	.	G	D	N	L	Y	I	A	Q	L	D	V	R	N	R	A	A	I	E	E	M	L	A	S	L	P	A	E	W
Query Conservation								.																			.																				.	.	.	.	.	.	.
Alig confidence								.																			.																				.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	V	L	I	T	G	A	G	K	G	S	I	G	A	E	V	L	Q	G	L	L	Q	G	G	A	K	V	V	V	T	T	S	R	F	S	K	Q	V	T	D	Y	Y	Q	S	I	Y	A	K	Y	G	A	K	G	S	T	L	I	V	V	P	F	N	Q	G	S	K	Q	D	V	E	A	L	I	E	F	I	Y	D	T	E
Template Known Secondary structure							S			S	S	S												T	T								S	S																			T	T										T	T														S		T
Template Predicted Secondary structure
Template SS confidence
		677	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.
		73							.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.					.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure			.	.	.	.	.	.																																																				.	.	.	.
Query SS confidence			.	.	.	.	.	.																																																				.	.	.	.
Query Sequence		C	.	.	.	.	.	.	N	I	D	I	L	V	N	N	A	G	L	A	L	G	M	E	P	A	H	K	A	S	V	E	D	W	E	T	M	I	D	T	N	N	K	G	L	V	Y	M	T	R	A	V	L	P	G	M	V	E	R	.	.	.	.	N	H	G	H	I	I	N	I	G	S	T	A	G	S	W	P	Y	A
Query Conservation			.	.	.	.	.	.																																																				.	.	.	.
Alig confidence			.	.	.	.	.	.																																																				.	.	.	.																	.	.
Template Conservation																																																																																.	.
Template Sequence		K	N	G	G	L	G	W	D	L	D	A	I	I	P	F	A	A	I	P	E	Q	G	I	E	L	E	H	I	D	S	K	S	E	F	A	H	R	I	M	L	T	N	I	L	R	M	M	G	C	V	K	K	Q	K	S	A	R	G	I	E	T	R	P	A	Q	V	I	L	P	M	S	P	N	H	G	T	F	G	.	.
Template Known Secondary structure		T	T	T	S						S												S	B		G	G	G													T																T	T	T			S											S		T	T		S	S	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		757	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	N	V	Y	G	A	T	K	A	F	V	R	Q	F	S	L	N	L	R	T	D	L	H	G	T	A	V	R	V	T	D	I	E	P	G	L	V	G	G	T	E	F	S	N	V	R	F	K	G	D	D	G	K	A	E	K	T	Y	Q	N	T	V	A	L	T	P	E	D	V	S	E	A	V	W	W	V	S	T
Query Conservation
Alig confidence																																											.	.	.	.	.	.												.	.
Template Conservation																																											.	.	.	.	.	.												.	.
Template Sequence		G	D	G	M	Y	S	E	S	K	L	S	L	E	T	L	F	N	R	W	H	S	E	S	W	A	N	Q	L	T	V	C	G	A	I	I	G	W	T	R	G	T	.	.	.	.	.	.	N	N	I	I	A	E	G	I	E	K	M	.	.	G	V	R	T	F	S	Q	K	E	M	A	F	N	L	L	G	L	L	T
Template Known Secondary structure			B	T	T								G	G	G								S	S		T	T	T															.	.	.	.	.	.			T	T						T	T	.	.	T		B													G	G	G	S
Template Predicted Secondary structure																																											.	.	.	.	.	.												.	.
Template SS confidence
		835	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.							.	.	.	.	880	.	.	.	.	.	.			.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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