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Job DescriptionP39831
Confidence100.00%DateThu Jan 5 12:00:56 GMT 2012
Rank57Aligned Residues234
% Identity22%Templatec2pd6D_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:estradiol 17-beta-dehydrogenase 8; PDBTitle: structure of human hydroxysteroid dehydrogenase type 8, hsd17b8
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNN
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Template Sequence  LALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLL. NHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSC
Template Known Secondary structure  TTTSTT
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   13......20.........30.........40.........50..... ....60.........70.........80.........90.
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  AGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNL
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Template Sequence  AGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTA
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GGG

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   104.....110.........120.........130.........140.........150.........160.........170.........180...
 
   162.......170.........180.........190.........200.........210.........220.. .......230.........240
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Query Sequence  RTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVSTL. PAHVNINTLEMMPVTQSY
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Template Sequence  ARELGRHGIRCNSVLPGFIATPMTQKVPQKVVD. KITEMIPMGHLGDPEDVADVVAFLASEDSGYITGTSVEV. . . TGGL
Template Known Secondary structure  GGGT
SB
STTTTTS
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B
SGGGTT

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   184.....190.........200.........210...... ...220.........230.........240.........250..... ....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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