Return to main results Retrieve Phyre Job Id

Job DescriptionP39831
Confidence97.06%DateThu Jan 5 12:00:56 GMT 2012
Rank314Aligned Residues44
% Identity23%Templatec2eggA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: crystal structure of shikimate 5-dehydrogenase (aroe) from2 geobacillus kaustophilus
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20..... ....30.........40.......
Predicted Secondary structure 






.





Query SS confidence 






















.





















Query Sequence  VLVTGATAGFGECITRRFIQQGH. KVIATGRRQERLQELKDELGDN
Query Conservation 






 


 


  

  
 . 


  
               
Alig confidence 





.















.





















Template Conservation 





.





   

   
   
 
 


  

  

      
Template Sequence  ILVIGA. GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDER
Template Known Secondary structure 

.STTT
S
SSS
SS
Template Predicted Secondary structure 
.









Template SS confidence 













































   144..... 150.........160.........170.........180........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions