Job Description P39831 Confidence 98.97% Date Thu Jan 5 12:00:56 GMT 2012 Rank 233 Aligned Residues 172 % Identity 13% Template c1t2aC_ PDB info PDB header:structural genomics,lyase Chain: C: PDB Molecule:gdp-mannose 4,6 dehydratase; PDBTitle: crystal structure of human gdp-d-mannose 4,6-dehydratase Resolution 1.84 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	L	V	T	G	A	T	A	G	F	G	E	C	I	T	R	R	F	I	Q	Q	G	H	K	V	I	A	T	G	R	R	Q	E	R	L	Q	E	L	K	D	E	L	G	D	N	L	Y	I	A	Q	L	D	V	R	N	R	A	A	I	E	E	M	L	A	S	L	P	A	E	W	C	N	I	D	I	L	V	N	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A	L	I	T	G	I	T	G	Q	D	G	S	Y	L	A	E	F	L	L	E	K	G	Y	E	V	H	G	I	V	R	R	S	S	S	F	N	T	G	R	I	E	H	L	Y	N	M	K	L	H	Y	G	D	L	T	D	S	T	C	L	V	K	I	I	N	E	V	K	P	T	E	I	Y	N	L	G	A	Q	S	H
Template Known Secondary structure							T	T	T	S													T	T											S	S				T	T	T	G	G	G										T	T															S							S
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	L	A	L	G	M	E	P	A	H	K	A	S	V	E	D	W	E	T	M	I	D	T	N	N	K	G	L	V	Y	M	T	R	A	V	L	P	G	M	V	E	R	N	H	G	H	I	I	N	I	G	S	T	A	G	S	W	P	Y	A	G	G	N	V	Y	G	A	T	K	A	F	V	R	Q	F	S	L	N	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	I	S	F	D	L	A	E	Y	T	A	D	V	D	G	V	G	T	L	R	L	L	D	A	V	K	T	C	G	L	I	N	S	V	K	F	Y	Q	A	S	T	S	E	L	Y	G	K	V	Q	E	I	P	Q	K	E	T	T	P	F	Y	P	R	S	P	Y	G	A	A	K	L	Y	A	Y	W	I	V	V	N	F
Template Known Secondary structure								S									T													T	T		T	T	T									G	G	G	G	S	S		S	S	S	S	B		T	T	S						S
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	D	L	H	G	T	A	V	R	V	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	E	A	Y	N	L	F	A	V	N	G	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions