Job Description P05194 Confidence 89.69% Date Thu Jan 5 10:58:42 GMT 2012 Rank 118 Aligned Residues 144 % Identity 19% Template d8ruca1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 1.60

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		65	.	.	.	.	70	.	.	.			.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.											.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure											.	.																																																		.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.																																																		.	.	.	.	.	.	.	.	.	.
Query Sequence		A	K	I	L	R	E	T	M	P	.	.	E	K	P	L	L	F	T	F	R	S	A	K	E	G	G	E	Q	A	I	S	T	E	A	Y	I	A	L	N	R	A	A	I	D	S	G	L	V	D	M	I	D	L	E	L	F	T	G	D	D	.	.	.	.	.	.	.	.	.	.	Q	V	K	E	T	V	A	Y	A	H
Query Conservation											.	.																																																		.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.														.	.	.	.																			.														.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.																			.
Template Sequence		I	Q	V	E	R	D	K	L	N	K	Y	G	R	P	L	L	G	C	T	I	K	P	K	L	.	.	.	.	G	L	S	A	K	N	Y	G	R	A	V	Y	E	C	L	R	G	G	.	L	D	F	T	D	D	E	N	V	N	S	Q	P	F	M	R	W	R	D	R	F	L	F	C	A	E	A	L	Y	K	A	Q	A
Template Known Secondary structure										T			S	S								S	S	S	S	.	.	.	.																	T	T	.		S	B				T	T		S	S	B	T	T	B
Template Predicted Secondary structure																										.	.	.	.																			.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.					.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.											190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																		.																																										.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.																																										.	.	.	.	.	.	.	.	.	.
Query Sequence		A	H	D	V	K	V	V	M	S	N	H	D	F	H	K	T	.	P	E	A	E	E	I	I	A	R	L	R	K	M	Q	S	F	D	A	D	I	P	K	I	A	L	M	P	Q	S	T	S	D	V	L	T	L	L	A	A	T	L	.	.	.	.	.	.	.	.	.	.	E	M	Q	E	Q	Y	A	D	R	P	I	I
Query Conservation																		.																																										.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.								.																																										.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.
Template Sequence		E	T	G	E	I	K	.	.	.	G	H	Y	L	N	A	T	A	G	T	C	E	D	M	M	K	R	A	V	F	A	R	E	L	G	V	P	I	V	M	H	D	Y	L	T	G	G	F	T	A	N	T	T	L	S	H	Y	C	R	D	N	G	L	L	L	H	I	H	R	A	M	H	A	V	I	D	R	Q	K	N	H
Template Known Secondary structure				S	S			.	.	.	B								S	S															T		S																									T								T	T						S		S	S	S
Template Predicted Secondary structure								.	.	.
Template SS confidence
		231	.	.	.	.	.				.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	M	S	M	A	K	T	G	V	I	S	R	L	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	M	H	F	R	V	L	A	K	A	L	R	L	S	G
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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