Job Description P05194 Confidence 93.75% Date Thu Jan 5 10:58:42 GMT 2012 Rank 93 Aligned Residues 167 % Identity 18% Template d2d69a1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 1.90

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		65	.	.	.	.	70	.	.	.			.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.											.	.	.	.	.	.	.	130	.
Predicted Secondary structure											.	.																																									.										.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.																																									.										.	.	.	.	.	.	.	.	.	.
Query Sequence		A	K	I	L	R	E	T	M	P	.	.	E	K	P	L	L	F	T	F	R	S	A	K	E	G	G	E	Q	A	I	S	T	E	A	Y	I	A	L	N	R	A	A	I	D	S	G	L	V	D	M	I	.	D	L	E	L	F	T	G	D	D	.	.	.	.	.	.	.	.	.	.	Q	V	K	E	T	V	A	Y	A
Query Conservation											.	.																																									.										.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.														.	.	.	.																			.					.										.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.																			.
Template Sequence		V	Q	G	I	R	E	F	M	G	V	K	D	R	P	L	T	A	T	V	P	K	P	K	M	.	.	.	.	G	W	S	V	E	E	Y	A	E	I	A	Y	E	L	W	S	G	G	.	I	D	L	L	K	D	D	E	N	F	T	S	F	P	F	N	R	F	E	E	R	V	R	K	L	Y	R	V	R	D	R	V	E
Template Known Secondary structure										T			S	S								S	S	S	S	.	.	.	.																	T	T	.		S						T	T		S		B	T	T	B
Template Predicted Secondary structure																										.	.	.	.																			.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.					.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.	.	.
Query Sequence		H	A	H	D	V	K	V	V	M	S	N	H	D	F	H	K	T	P	E	A	E	E	I	I	A	R	L	R	K	M	Q	S	F	D	A	D	I	P	K	I	A	L	M	P	Q	S	T	S	D	V	L	T	L	L	A	A	T	L	E	M	Q	E	Q	Y	A	D	R	P	I	I	T	.	.	.	.	.	.	.	.	.
Query Conservation																																																																									.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.																																																		.	.	.	.	.							.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.																																																		.	.	.	.	.
Template Sequence		A	E	T	G	E	T	K	E	.	.	.	Y	L	I	N	I	T	G	P	V	N	I	M	E	K	R	A	E	M	V	A	N	E	G	G	Q	Y	V	M	I	D	I	V	V	A	G	W	S	A	L	Q	Y	M	R	E	V	T	E	D	L	.	.	.	.	.	G	L	A	I	H	A	H	R	A	M	H	A	A	F	T
Template Known Secondary structure					S	S				.	.	.				B			S	S															T																											.	.	.	.	.	T								T	T	T
Template Predicted Secondary structure										.	.	.																																																		.	.	.	.	.
Template SS confidence
		215	.	.	.	.	220	.	.				.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.						.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
								203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	M	S	M	A	K	T	G	V	I	S	R	L	A	G	E	V	F	G	S	A	A	T	F	G	A	V	K	K	A	S	A	P	G	Q	I	S	V	N	D	L	R	T	V	L	T
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																.	.	.
Template Conservation																							.	.	.
Template Sequence		R	N	P	R	H	G	I	T	M	L	A	L	A	K	A	A	R	M	I	G	V	.	.	.	D	Q	I	H	T	G	T	A	V	G	K	M	A	G	N	Y	E	E	I	K	R	I	N	D	F	L	L
Template Known Secondary structure		S		T	T	S	S														T		.	.	.	S									S	S	S
Template Predicted Secondary structure																							.	.	.
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.				.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions