|   |
17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | |
|
|
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  | . | . | . |  |  |
|
|  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | I | I | V | S | L | M | A | K | D | I | A | S | V | K | S | E | A | L | A | Y | R | E | A | D | F | D | I | L | E | W | R | V | D | H | Y | A | D | L | S | N | V | E | S | V | M | A | A | A | K | I | L | R | E | T | M | P | E | K | P | L | L | F | . |
. |
. |
T | F | R | S | A | K | E | G | G | E | Q | A | I | S |
Query Conservation |   |
|
|   |
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|   | . | . | . |
|   |
|   |   |   |
|
|
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
| . | . | . | . | . | . | . |
Template Conservation |   |
  |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |
|
|   |   |
|   |
|   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |   |   |
|   |   |   |   |   |   |   | . |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   | . | . | . | . | . | . | . |
Template Sequence |   |
K | I | V | A | V | L | R | A | N | S | V | E | E | A | K | E | K | A | L | A | V | F | E | G | G | V | H | L | I | E | I | T | F | T | V | P | D | A | . |
. |
. |
. |
. |
. |
. |
D | T | V | I | K | E | L | S | F | L | K | . |
E | K | G | A | I | I | G | A | G | T | V | T | S | V | E | Q | . |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
|  |  |  |  |  |
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  | T | T | S | T | T |  | . | . | . | . | . | . | . |  |  |  |  |  |  | T |  |  |  |  | . |  | T | T |
|  |  |  |  |  | S |
|
| S |  |  |  | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
. | 50 | . | . | . | . | . | . | . | . | . | |
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | |
|
|
|
|
|
|
  |
  |   |
94 | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | E | A | Y | I | A | L | N | R | A | A | I | D | S | G | L | V | D | M | I | D | L | E | L | F | T | G | D | D | Q | V | K | E | T | V | A | Y | A | H | A | H | D | V | K | V | V | M | S | N | H | D | F | H | K | T | P | E | A | E | E | I | I | A | R | L | R | K | M | Q | S | F | D | A | D | I | P | K | I | A | L |
Query Conservation |   |
  |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|   |
|   |   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |
Alig confidence |   |
. | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . |
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
Template Conservation |   |
. | . | . | . | . | . | . |   |   |   |
|   |   |   |
| . |
|   |   |
| . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|   | . | . | . | . |
|   |   |
| . | . | . | . | . | . |   |   |   |
|   |   |   |
|
|
|   |
|   |   | . | . |
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
C | R | K | A | V | E | S | G | . |
A | E | F | I | . |
. |
. |
. |
. |
V | S | P | H | L | D | E | E | I | S | Q | F | C | K | E | K | G | V | F | Y | M | P | G | V | M | . |
. |
. |
. |
T | P | T | E | . |
. |
. |
. |
. |
. |
L | V | K | A | M | K | L | G | H | T | I | L | K | L | . |
. |
Template Known Secondary structure |   |
. | . | . | . | . | . | . |  |  |  |  |  |  |  | T | . |
| S |  |  | . | . | . | . | . |  |
| S | S |
|
|  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |
|  |  |
| . | . | . | . | S |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  | T | T |
|
|  |  |  |  | . | . |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . |  |  |  |  |  |  |  |
| . |
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |
| . | . | . | . |
|  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
76 | . | . | . | 80 | . | . | . | |
. | . | . | . | |
|
|
|
|
. | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | |
|
|
|
. | . | . | . | |
|
|
|
|
|
. | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | |
|
  |
  |   |
174 | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | P | Q | S | T | S | D | V | L | T | L | L | A | A | T | L | E | M | Q | E | Q | Y | A | D | R | P | I | I | T | M | S |
Query Conservation |   |
  |   |   |   |   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
Alig confidence |   |
. | . | . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . |   |
|   |   |   |   |
|   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|
Template Sequence |   |
. |
. |
. |
F | P | G | E | V | V | G | P | . |
Q | F | V | K | A | M | K | G | P | F | P | N | V | K | F | V | P | T | G |
Template Known Secondary structure |   |
. | . | . | T | T |  |  |  |  |  |  | . |  |  |  |  |  |  |  | T | T |
| T | T |
|  |  |  |  | B | S |
Template Predicted Secondary structure |   |
. | . | . |
|
|
|
|
|
|  |  | . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
131 | . | . | . | . | . | . | . | |
. | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . |
  |