Job Description P05194 Confidence 96.61% Date Thu Jan 5 10:58:42 GMT 2012 Rank 44 Aligned Residues 137 % Identity 14% Template d1vyra_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 0.9

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.																			.	.	50	.	.	.		.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.				.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.						.																									.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.						.																									.	.	.
Query Sequence		I	A	S	V	K	S	E	A	L	A	Y	R	E	A	D	F	D	I	L	E	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	D	H	Y	A	.	D	L	S	N	V	.	E	S	V	M	A	A	A	K	I	L	R	E	T	M	P	E	K	P	L	L	F	T	F	R	.	.	.	S
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.						.																									.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.						.																									.	.	.
Template Conservation
Template Sequence		V	N	D	F	R	Q	A	V	A	N	A	R	E	A	G	F	D	L	V	E	L	H	S	A	H	G	Y	L	L	H	Q	F	L	S	P	S	S	N	Q	R	T	D	Q	Y	G	G	S	V	E	N	R	A	R	L	V	L	E	V	V	D	A	V	C	N	E	W	S	A	D	R	I	G	I	R	V	S	P	I	G	T
Template Known Secondary structure															T	T		S								T	T	S								T	T	T					S	T	T	S	S	S					T														S		G	G	G								S	S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.				.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																			.	.	.
Query SS confidence																																			.	.	.
Query Sequence		A	K	E	G	G	E	Q	A	I	S	T	E	A	Y	I	A	L	N	R	A	A	I	D	S	G	L	V	D	M	I	D	L	E	.	.	.	L	F	T	G	D	D	Q	V	K	E	T	V	A	Y	A	H	A	H	D	V	K	V	V	M	S	N	H	D	F	H	K	T	P	E	A	E	E	I	I	A	R	L	R	K
Query Conservation																																			.	.	.
Alig confidence																											.								.	.	.																															.	.	.	.	.	.	.	.
Template Conservation																											.																																									.	.	.	.	.	.	.	.
Template Sequence		F	Q	N	V	D	N	G	P	N	E	E	A	D	A	L	Y	L	I	E	E	L	A	K	R	G	.	I	A	Y	L	H	M	S	E	T	D	L	A	G	G	K	P	Y	S	E	A	F	R	Q	K	V	R	E	R	F	H	G	V	I	I	G	A	G	A	Y	T	.	.	.	.	.	.	.	.	A	E	K	A	E	D
Template Known Secondary structure		B	T	T	B				T	T															T	T	.		S								B	T	T	B																		S						S	S			.	.	.	.	.	.	.	.
Template Predicted Secondary structure																											.																																									.	.	.	.	.	.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.		.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.									.	.	.	.	.	310
		161	.	.	.	.		.	.	.	.	170	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		M	Q	S	F	D	.	A	D	I	P	K	I	A
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		L	I	G	K	G	L	I	D	A	V	A	F	G
Template Known Secondary structure					T	T	S		S					S
Template Predicted Secondary structure
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions