Job Description P05194 Confidence 87.65% Date Thu Jan 5 10:58:42 GMT 2012 Rank 129 Aligned Residues 143 % Identity 13% Template d1vc4a_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 1.80

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.			80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.
Query SS confidence																																																					.	.
Query Sequence		S	V	K	S	E	A	L	A	Y	R	E	A	D	F	D	I	L	E	W	R	V	D	H	Y	A	D	L	S	N	V	E	S	V	M	A	A	A	K	I	L	R	E	T	M	P	E	K	P	L	L	F	.	.	T	F	R	S	A	K	E	G	G	E	Q	A	I	S	T	E	A	Y	I	A	L	N	R	A	A	I	D
Query Conservation																																																					.	.
Alig confidence																																										.	.	.	.	.							.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	P	V	E	A	A	L	A	Y	A	R	G	G	A	R	A	V	S	V	L	T	E	P	H	R	F	G	G	S	L	L	D	L	K	R	V	R	E	A	V	.	.	.	.	.	D	L	P	L	L	R	K	D	F	V	V	D	P	F	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	E	A	R	A
Template Known Secondary structure													T	T		S									S	S	S															.	.	.	.	.		S						S				S				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																										.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.						.	.	.	.	110	.	.	.	.	.	.	.	.	.	120															.	.	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.						.	.	.	.	.	.	.	180	.
Predicted Secondary structure																																																																				.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.
Query Sequence		S	G	L	V	D	M	I	D	L	E	L	F	T	G	D	D	Q	V	K	E	T	V	A	Y	A	H	A	H	D	V	K	V	V	M	S	N	H	D	F	H	K	T	P	E	A	E	E	I	I	A	R	L	R	K	M	Q	S	F	D	A	D	I	P	K	I	A	.	.	.	.	.	L	M	P	Q	S	T	S	D	V
Query Conservation																																																																				.	.	.	.	.
Alig confidence				.																																				.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Template Conservation				.																																				.	.	.	.	.	.	.	.	.	.
Template Sequence		F	G	.	A	S	A	A	L	L	I	V	A	L	L	G	E	L	T	G	A	Y	L	E	E	A	R	R	L	G	L	E	A	L	V	E	V	H	T	.	.	.	.	.	.	.	.	.	.	E	R	E	L	E	I	A	L	E	A	G	A	E	V	L	G	I	N	N	R	D	L	A	T	L	H	I	N	L	E	T	A
Template Known Secondary structure		T	T	.		S										G	G	G												T									S	.	.	.	.	.	.	.	.	.	.											T		S						S	B		T	T	T			B		T	T
Template Predicted Secondary structure				.																																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		127	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.											.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	L	L	A	A	T	L	E	M	Q	E	Q	Y	A	D	R	P	I	I	T	M	S
Query Conservation
Alig confidence														.	.	.
Template Conservation														.	.	.
Template Sequence		P	R	L	G	R	L	A	R	K	R	G	F	.	.	.	G	G	V	L	V	A	E	S
Template Known Secondary structure											T	T		.	.	.		S						S
Template Predicted Secondary structure														.	.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.				.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions