Return to main results Retrieve Phyre Job Id

Job DescriptionP05194
Confidence77.75%DateThu Jan 5 10:58:42 GMT 2012
Rank172Aligned Residues126
% Identity12%Templated1uasa2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution1.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   83......90.........100...... ...110.........120... ......130.........140
Predicted Secondary structure 







.....








.................


Query SS confidence 























. . . . .
















. . . . . . . . . . . . . . . . .
















Query Sequence  SAKEGGEQAISTEAYIALNRAAID. . . . . SGLVDMIDLELFTGDDQ. . . . . . . . . . . . . . . . . VKETVAYAHAHDVKVVM
Query Conservation     


           

     .....    
 




      .................   
          

 
Alig confidence 























.....

.













.................
















Template Conservation 


      
 
  
      
   

   
.     




     
  
        

 

  
   
   
 
 

Template Sequence  NSWNHFYCGINEQIIRETADALVNTGLAKLG. YQYVNIDDCWAEYSRDSQGNFVPNRQTFPSGIKALADYVHAKGLKLGI
Template Known Secondary structure  STT


TST.



SS
B
SS

TTS


B
TTT
TT
TT
Template Predicted Secondary structure 










.



























Template SS confidence 















































































   14.....20.........30.........40.... .....50.........60.........70.........80.........90..
 
   141.. ......150.........160.........170.........180.........190.........200.........
Predicted Secondary structure 
......























Query SS confidence 


. . . . . .

































































Query Sequence  SNH. . . . . . DFHKTPEAEEIIARLRKMQSFDADIPKIALMPQSTSDVLTLLAATLEMQEQYADRPIITMSMAKTG
Query Conservation 
 
...... 
  

    
          







       
 
 

             
 
   

  
Alig confidence 


......

































































Template Conservation 
  

    
   
               



 

 
                  

   
       
     
Template Sequence  YSDAGSQTCSNKMPGSLDHEEQDVKTFASWGVDYLKYDNCNDAGRSVMERYTRMSNAMKTYGKNIFFSLCEWGKE
Template Known Secondary structure  SSSB
TTSSSB

TT
T





TT


TTSSTTTT
Template Predicted Secondary structure 
































Template SS confidence 










































































   93......100.........110.........120.........130.........140.........150.........160.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions