|   |
59 | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
120 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
Query Sequence |   |
E | S | V | M | A | A | A | K | I | L | R | E | T | M | P | E | K | P | L | L | F | T | F | R | S | A | K | E | G | G | E | Q | A | I | S | T | E | A | Y | I | A | L | N | R | A | A | I | D | S | G | L | V | D | M | I | D | L | E | L | F | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | D | D | Q | V | K | E |
Query Conservation |   |
  |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|   |
|   |
|   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |   |   |
|   |   |   |   | . |   |   |
|
|
|
| . | . | . | . |
|   |
|   |
|
| . | . |
|   |   |   |   |
|   |   |
|
|   |   |   |   |   |
|
| . |
|
|
|
|   |
|
|
|
|   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |
|
|   |
|
Template Sequence |   |
T | Q | V | V | E | V | L | E | F | M | S | D | A | S | . |
D | V | P | I | L | L | . |
. |
. |
. |
D | A | D | T | G | Y | . |
. |
G | N | F | N | N | A | R | R | L | V | R | K | L | E | D | R | G | . |
V | A | G | A | C | L | E | D | K | L | F | G | R | A | Q | P | L | A | D | I | E | E | F | A | L | K | I | K | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T |
| . | S | S |
|  |  |  | . | . | . | . |  |
|
| S | S |
| . | . | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | . |
|
|  |  |  |  |  |
| B |
|
|
| T | T |
|
| B |
|
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|
|
|  |  |  | . | . | . | . |  |  |  |
|
|
| . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
65 | . | . | . | . | 70 | . | . | . | . | . | . | . | . | |
. | 80 | . | . | . | . | |
|
|
|
. | . | . | . | . | 90 | |
|
. | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | |
. | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . |
  |
  |   |
127 | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | V | A | Y | A | H | A | H | D | V | K | V | V | M | S | N | H | D | F | H | K | T | P | E | A | E | E | I | I | A | R | L | R | K | M | Q | S | F | D | A | D | I | P | K | I | A | L | M | P | Q | S | T | S | D | V | L | T | L | L | A | A | T | L | E | M | Q | E | Q | Y | A | D | R | P | I | I | T | M | S | M | A |
Query Conservation |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|   |
|   |   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
| . | . | . | . |
Template Conservation |   |
|   |   |
|   |   |   |   |
|   |   |
|   |
|
|
|
|
|   |   |   |   |   |
|
|
|
|
|
|   |
|
|   |
|
|   |
|
|
|
|
|   |
|
|
|   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   | . | . | . | . |
Template Sequence |   |
C | K | D | S | Q | T | D | P | D | F | C | I | V | A | R | V | E | A | F | I | A | G | W | G | L | D | E | A | L | K | R | A | E | A | Y | R | N | A | G | A | D | A | I | L | M | H | S | K | K | A | D | P | S | D | I | E | A | F | M | K | A | W | N | N | . |
. |
. |
. |
. |
. |
Q | G | P | V | V | I | . |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |
| S | S | T | T |
|  |  |  |  |  |  |
| T | T | T | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
|
|
| S | S | S | S |  |  |  |  |  |  |  |  |  |  | T | T | . | . | . | . | . | . |
| S |
|  |  |  | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . |
|
|
|  |  |  | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
145 | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
. | 210 | . | . | . | . | |
|
|
|
  |
  |   |
207 | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | T | G | V | I | S | R | L | A | G | E | V | F | G | S | A | A | T | F | G | A | V | K | K | A | S | A | P | G | Q | I | S | V | N | D | L | R | T | V |
Query Conservation |   |
  |   |
|   |   |
|
|
|   |   |   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |
|
|
|
|
|   |   |   |   |
|
|   |   |   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | P | T | K | Y | Y | K | T | P | T | D | H | F | R | D | M |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
| S | T | T | T | T | S |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
215 | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 |
  |