Job Description P05194 Confidence 87.54% Date Thu Jan 5 10:58:42 GMT 2012 Rank 130 Aligned Residues 175 % Identity 15% Template d1rbla1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 2.20

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120											.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																																																						.								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.								.	.	.	.	.	.	.	.	.	.
Query Sequence		M	A	A	A	K	I	L	R	E	T	M	P	E	K	P	L	L	F	T	F	R	S	A	K	E	G	G	E	Q	A	I	S	T	E	A	Y	I	A	L	N	R	A	A	I	D	S	G	L	V	D	M	I	.	D	L	E	L	F	T	G	.	.	.	.	.	.	.	.	.	.	D	D	Q	V	K	E	T	V	A	Y
Query Conservation																																																						.								.	.	.	.	.	.	.	.	.	.
Alig confidence													.														.	.	.	.																			.					.								.	.	.	.	.	.	.	.	.	.
Template Conservation													.														.	.	.	.																			.
Template Sequence		I	Q	V	E	R	D	L	L	N	K	Y	.	G	R	P	M	L	G	C	T	I	K	P	K	L	.	.	.	.	G	L	S	A	K	N	Y	G	R	A	V	Y	E	C	L	R	G	G	.	L	D	F	T	K	D	D	E	N	I	N	S	Q	P	F	Q	R	W	R	D	R	F	L	F	V	A	D	A	I	H	K	S
Template Known Secondary structure										T			.	S	S						B		S	S	S	S	.	.	.	.																	T	T	.		S						T	T		S	S	B	T	T	B
Template Predicted Secondary structure													.														.	.	.	.																			.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.					.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.											190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.
Query Sequence		A	H	A	H	D	V	K	V	V	M	S	N	H	D	F	H	K	T	P	E	A	E	E	I	I	A	R	L	R	K	M	Q	S	F	D	A	D	I	P	K	I	A	L	M	P	Q	S	T	S	D	V	L	T	L	L	A	A	T	L	.	.	.	.	.	.	.	.	.	.	E	M	Q	E	Q	Y	A	D	R	P	I
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.																																													.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.
Template Sequence		Q	A	E	T	G	E	I	K	G	H	Y	L	N	.	.	V	T	A	P	T	C	E	E	M	M	K	R	A	E	F	A	K	E	L	G	M	P	I	I	M	H	D	F	L	T	A	G	F	T	A	N	T	T	L	A	K	W	C	R	D	N	G	V	L	L	H	I	H	R	A	M	H	A	V	I	D	R	Q	R	N
Template Known Secondary structure						S	S								.	.				S	S														T	T		S																									T								T	T						S		S	S
Template Predicted Secondary structure															.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.			.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	M	S	M	A	K	T	G	V	I	S	R	L	A	G	E	V	F	G	S	A	A	T	F	G	A	V	K	K	A	S	A	P	G	Q	I	S	V	N	D	L	R	T	V	L	T
Query Conservation
Alig confidence																			.	.	.
Template Conservation																			.	.	.
Template Sequence		H	G	I	H	F	R	V	L	A	K	C	L	R	L	S	G	G	.	.	.	D	H	L	H	S	G	T	V	V	G	K	L	E	G	D	K	A	S	T	L	G	F	V	D	L	M	R
Template Known Secondary structure		S	S																.	.	.	S							S	S	S	S	S
Template Predicted Secondary structure																			.	.	.
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.				.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions