 |
Job Description | P05194 | Confidence | 64.19% | Date | Thu Jan 5 10:58:42 GMT 2012 |
Rank | 211 | Aligned Residues | 83 |
% Identity | 27% | Template | d1qapa1 |
SCOP info | TIM beta/alpha-barrel
| Nicotinate/Quinolinate PRTase C-terminal domain-like
| NadC C-terminal domain-like
|
Resolution | 2.80 |
|
 |
  |   |
61 | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | M | A | A | A | K | I | L | R | E | T | M | P | E | K | P | L | L | F | T | F | R | S | A | K | E | G | G | E | Q | A | I | S | T | E | A | Y | I | A | L | N | R | A | A | I | D | S | G | L | V | D | M | I | D | L | E | L | F | T | G | D | D | Q | V | K | E | T | V | A | Y | A | H | A | H | D | V | K | V | V | M |
Query Conservation |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|   |
|   |
|   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |
|   |
|
|
|   |
|   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |
|   |   |   |
| . |
|
|   |
|   |
|
| . |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   | . |   |
|   |
|   |
|
Template Sequence |   |
V | R | Q | A | V | E | K | A | F | W | L | H | P | D | V | P | V | E | V | E | V | E | N | L | D | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | D | D | A | L | K | A | G | . |
A | D | I | I | M | L | D | . |
N | F | N | T | D | Q | M | R | E | A | V | K | R | V | N | G | . |
Q | A | R | L | E | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | S | T | T | S |
|  |  |  |  |  | S | S |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  | T | T | . |
| S |  |  |  |  | S | . | S |
|
|  |  |  |  |  |  |  |  |  | T | T |
| T | . | T |
|
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |
| . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
195 | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | |
. | 230 | . | . | . | . | . | |
. | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | |
. | . | . | . | . | . |
  |
  |   |
141 | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | N | H | D | F | H | K | T | P | E | A | E | E | I | I | A | R | L | R | K | M | Q | S | F | D | A | D | I | P |
Query Conservation |   |
|   |
|   |
|   |   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
Alig confidence |   |
|
| . | . | . |
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
| . | . | . |
|
|   |   | . | . | . | . | . | . |   |
|
|   |   |   |   |   |   |
|
|
|   |
|
Template Sequence |   |
S | G | . |
. |
. |
N | V | T | A | . |
. |
. |
. |
. |
. |
E | T | L | R | E | F | A | E | T | G | V | D | F | I |
Template Known Secondary structure |   |
|
| . | . | . |
| S |
|  | . | . | . | . | . | . |  |  |  |  |  |  |  |  | T | T |
| S |  |  |
Template Predicted Secondary structure |   |
 |
| . | . | . |
|
|
|  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
258 | . | |
|
|
260 | . | . | . | |
|
|
|
|
|
. | . | . | . | . | . | 270 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|