Job Description P05194 Confidence 95.46% Date Thu Jan 5 10:58:42 GMT 2012 Rank 69 Aligned Residues 172 % Identity 17% Template d1km4a_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Decarboxylase Resolution 1.50

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	K	I	I	V	S	L	M	A	K	D	I	A	S	V	K	S	E	A	L	A	Y	R	E	A	D	F	D	I	L	E	W	R	V	D	H	Y	A	D	L	S	N	V	E	S	V	M	A	A	A	K	I	L	R	E	T	M	P	E	K	P	L	L	F	T	F	R	S	A	K	E	G	G	E	Q	A	I	S	T
Query Conservation
Alig confidence																												.																	.	.	.	.	.											.														.	.	.	.	.	.	.
Template Conservation																												.																	.	.	.	.	.											.														.	.	.	.	.	.	.
Template Sequence		M	N	R	L	I	L	A	M	D	L	M	N	R	D	D	A	L	R	V	T	G	E	V	R	E	Y	.	I	D	T	V	K	I	G	Y	P	L	V	L	S	E	G	M	.	.	.	.	.	D	I	I	A	E	F	R	K	R	F	.	G	C	R	I	I	A	D	F	A	V	A	D	I	.	.	.	.	.	.	.	P
Template Known Secondary structure		G	G	G								S	S												T	T	T	.		S														T	.	.	.	.	.											.												S		.	.	.	.	.	.	.
Template Predicted Secondary structure																												.																	.	.	.	.	.											.														.	.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.						.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.								.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140				.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure																																																.	.	.
Query SS confidence																																																.	.	.
Query Sequence		E	A	Y	I	A	L	N	R	A	A	I	D	S	G	L	V	D	M	I	D	L	E	L	F	T	G	D	D	Q	V	K	E	T	V	A	Y	A	H	A	H	D	V	K	V	V	M	.	.	.	S	N	H	D	F	H	K	T	P	E	A	E	E	I	I	A	R	L	R	K	M	Q	S	F	D	A	D	I	P	K	I
Query Conservation																																																.	.	.
Alig confidence																.																																.	.	.
Template Conservation																.
Template Sequence		E	T	N	E	K	I	C	R	A	T	F	K	A	G	.	A	D	A	I	I	V	H	G	F	P	G	A	D	S	V	R	A	C	L	N	V	A	E	E	M	G	R	E	V	F	L	L	T	E	M	S	H	P	G	A	E	M	F	I	Q	G	A	A	D	E	I	A	R	M	G	V	D	L	G	V	K	N	Y	V	G
Template Known Secondary structure														T	T	.		S						S	T	T																T								S		S	S	G	G	G	G	T	T																T
Template Predicted Secondary structure																.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	M	P	Q	S	T	S	D	V	L	T	L	L	A	A	T	L	E	M	Q	E	Q	Y	A	D	R	P	I	I	T	M	S	M	A	K	T	G
Query Conservation
Alig confidence		.	.																		.	.	.	.	.	.
Template Conservation		.	.																		.	.	.	.	.	.
Template Sequence		.	.	P	S	T	R	P	E	R	L	S	R	L	R	E	I	I	G	Q	.	.	.	.	.	.	D	S	F	L	I	S	P	G	V	G	A	Q	G
Template Known Secondary structure		.	.		T	T														S	.	.	.	.	.	.	S	S							B	S	T	T	S
Template Predicted Secondary structure		.	.																		.	.	.	.	.	.
Template SS confidence
				157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.							.	.	.	.	.	.	180	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions