Job Description P05194 Confidence 55.12% Date Thu Jan 5 10:58:42 GMT 2012 Rank 232 Aligned Residues 150 % Identity 13% Template d1k77a_ SCOP info TIM beta/alpha-barrel Xylose isomerase-like Hypothetical protein YgbM (EC1530) Resolution 1.63

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.				80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																.																																																				.	.	.
Query SS confidence																.																																																				.	.	.
Query Sequence		A	P	K	I	I	V	S	L	M	A	K	D	I	A	.	S	V	K	S	E	A	L	A	Y	R	E	A	D	F	D	I	L	E	W	R	V	D	H	Y	A	D	L	S	N	V	E	S	V	M	A	A	A	K	I	L	R	E	T	M	P	E	K	P	L	L	F	.	.	.	T	F	R	S	A	K	E	G	G	E	Q
Query Conservation																.																																																				.	.	.
Alig confidence																.																				.	.	.																			.	.	.	.	.							.	.	.
Template Conservation																																				.	.	.																			.	.	.	.	.
Template Sequence		X	P	R	F	A	A	N	L	S	X	X	F	T	E	V	P	F	I	E	R	F	A	A	A	R	K	A	G	F	D	A	V	E	F	.	.	.	L	F	P	Y	N	Y	S	T	L	Q	I	Q	K	Q	L	E	Q	N	.	.	.	.	.	H	L	T	L	A	L	F	N	T	A	P	G	D	I	N	A	G	E	W	G
Template Known Secondary structure									T	T	T	S	S	T	T	S		G	G	G									T		S					.	.	.	S			T	T	S												T	.	.	.	.	.	T													G	G	G	T		S
Template Predicted Secondary structure																																				.	.	.																			.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.				.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.						.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		91	.	.	.									.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.														.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	I	S	T	.	.	.	.	.	.	.	.	E	A	Y	I	A	L	N	R	A	A	I	D	S	G	L	V	D	M	I	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	F	T	G	D	D	Q	V	K	E	T	V	A	Y	A	H	A	H	D	V	K	V	V	M	S	N	H	D	F	H	K	T	P
Query Conservation						.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.															.							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.
Template Sequence		L	S	A	L	P	G	R	E	H	E	A	H	A	D	I	D	L	A	L	E	Y	A	L	A	L	N	.	C	E	Q	V	H	V	X	A	G	V	V	P	A	G	E	D	A	E	R	Y	R	A	V	F	I	D	N	I	R	Y	A	A	D	R	F	A	P	H	G	K	R	I	L	V	E	A	L	S	P	G	V	K	P
Template Known Secondary structure		S	T	T		T	T																			T	T	.		S								B			T	T	S																					G	G	G	T										T	T	T	S	T
Template Predicted Secondary structure																												.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		150			.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure			.	.
Query SS confidence			.	.
Query Sequence		E	.	.	A	E	E	I	I	A	R	L	R	K	M	Q	S	F	D	A	D	I	P	K	I	A	L
Query Conservation			.	.
Alig confidence			.	.
Template Conservation
Template Sequence		H	Y	L	F	S	S	Q	Y	Q	A	L	A	I	V	E	E	V	A	R	D	N	V	F	I	Q	L
Template Known Secondary structure		T	B	S			S														T	T
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions