Job Description P05194 Confidence 94.87% Date Thu Jan 5 10:58:42 GMT 2012 Rank 78 Aligned Residues 226 % Identity 12% Template c3sz8D_ PDB info PDB header:transferase Chain: D: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase 2; PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from2 burkholderia pseudomallei Resolution 2.05 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.			.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.					40	.	.	.	.	.	.	.								.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.
Predicted Secondary structure																		.	.																								.	.	.	.									.	.	.	.	.	.	.												.
Query SS confidence																		.	.																								.	.	.	.									.	.	.	.	.	.	.												.
Query Sequence		M	K	T	V	T	V	K	D	L	V	I	G	T	G	A	P	.	.	K	I	I	V	S	L	M	A	K	D	I	A	S	V	K	S	E	A	L	A	Y	R	E	.	.	.	.	A	D	F	D	I	L	E	W	.	.	.	.	.	.	.	R	V	D	H	Y	A	D	L	S	N	V	.	E	S	V	M	A	A	A	K
Query Conservation																		.	.																								.	.	.	.									.	.	.	.	.	.	.												.
Alig confidence																		.	.																								.	.	.	.									.	.	.	.	.	.	.												.
Template Conservation
Template Sequence		M	N	V	A	I	S	P	G	V	T	A	G	N	S	L	P	F	V	L	F	G	G	I	N	V	L	E	S	L	D	F	T	L	D	V	C	G	E	Y	V	A	V	T	R	K	L	G	I	P	F	V	F	K	A	S	F	D	K	A	N	R	S	S	I	H	S	Y	R	G	V	G	L	D	E	G	L	K	I	F	A
Template Known Secondary structure								T	T					T	T	S																																T									S			T	T		S	S	T	T	S				S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	R	E	T	M	P	E	K	P	L	L	F	T	F	R	S	A	K	E	G	G	E	Q	A	I	S	T	E	A	Y	I	A	L	N	R	A	A	I	D	S	G	L	V	D	M	I	D	L	E	L	F	T	G	D	D	Q	V	K	E	T	V	A	Y	A	H	A	H	D	V	K	V	V	M	S	N	H	D	F	H
Query Conservation
Alig confidence								.														.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.													.	.																					.	.	.
Template Conservation								.														.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.													.	.																					.	.	.
Template Sequence		E	V	K	A	R	F	.	G	V	P	V	I	T	D	V	H	E	A	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	P	V	A	E	I	.	.	A	D	V	L	Q	V	P	A	F	L	A	R	.	.	Q	T	D	L	V	V	A	I	A	K	A	G	K	P	V	N	V	K	K	P	.	.	.
Template Known Secondary structure								.										S	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.		S						G	G	G	T	T	.	.											T		S								.	.	.
Template Predicted Secondary structure								.														.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.													.	.																					.	.	.
Template SS confidence
		81	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.															100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		147	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.			.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure				.																										.	.																																								.
Query SS confidence				.																										.	.																																								.
Query Sequence		K	T	.	P	E	A	E	E	I	I	A	R	L	R	K	M	Q	S	F	D	A	D	I	P	K	I	A	L	.	.	M	P	Q	S	T	S	D	V	L	T	L	L	A	A	T	L	E	M	Q	E	Q	Y	A	D	R	P	I	I	T	M	S	M	A	K	T	G	V	I	S	.	R	L	A	G	E	V	F	G	S	A
Query Conservation				.																										.	.																																								.
Alig confidence		.		.																										.	.																																								.
Template Conservation		.
Template Sequence		.	Q	F	M	S	P	T	Q	L	K	H	V	V	S	K	C	G	E	V	G	N	D	R	V	M	L	C	E	R	G	S	S	F	G	Y	D	N	L	V	V	D	M	L	G	F	R	Q	M	A	E	T	T	G	G	C	P	V	I	F	D	V	T	H	S	L	Q	V	L	D	L	A	R	A	G	I	A	V	G	I	A
Template Known Secondary structure		.	T	T	S		T	T	S											T	T														S	S	S						T	T								T	T	T	S							T	T	T	T																S
Template Predicted Secondary structure		.
Template SS confidence
			139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
					223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	A	T	F	G	A	V	K	K	A	S	A	P	G	Q	I	S	V	N	D	L	R	T	V	L	T	I	L
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		G	L	F	L	E	A	H	P	D	P	D	R	A	R	P	S	A	L	P	L	H	Q	L	E	G	L	L	S	Q	M
Template Known Secondary structure									S		S	T	T								G	G	G
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions