Job Description P05194 Confidence 77.54% Date Thu Jan 5 10:58:42 GMT 2012 Rank 175 Aligned Residues 216 % Identity 13% Template c3stgA_ PDB info PDB header:transferase Chain: A: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase; PDBTitle: crystal structure of a58p, del(n59), and loop 7 truncated mutant of 3-2 deoxy-d-manno-octulosonate 8-phosphate synthase (kdo8ps) from3 neisseria meningitidis Resolution 2.20 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.			.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.					.	.	40	.	.	.	.	.	.									.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.																					.	.	.	.										.	.	.	.	.	.	.	.
Query SS confidence																.	.																					.	.	.	.										.	.	.	.	.	.	.	.
Query Sequence		V	T	V	K	D	L	V	I	G	T	G	A	P	K	.	.	I	I	V	S	L	M	A	K	D	I	A	S	V	K	S	E	A	L	A	Y	.	.	.	.	R	E	A	D	F	D	I	L	E	.	.	.	.	.	.	.	.	W	R	V	D	H	Y	A	D	L	S	N	V	E	S	V	M	A	A	A	K	I	L	R
Query Conservation																.	.																					.	.	.	.										.	.	.	.	.	.	.	.
Alig confidence																.	.																					.	.	.	.										.	.	.	.	.	.	.	.										.
Template Conservation																																																																				.
Template Sequence		I	K	I	N	D	I	T	L	G	N	N	S	P	F	V	L	F	G	G	I	N	V	L	E	S	L	D	S	T	L	Q	T	C	A	H	Y	V	E	V	T	R	K	L	G	I	P	Y	I	F	K	A	S	F	D	K	P	R	S	S	I	H	S	Y	R	G	V	.	G	L	E	E	G	L	K	I	F	E	K	V	K
Template Known Secondary structure					T	T					T	T	S																																T									S			T	T	S		T	T	S				S	.
Template Predicted Secondary structure																																																																				.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		E	T	M	P	E	K	P	L	L	F	T	F	R	S	A	K	E	G	G	E	Q	A	I	S	T	E	A	Y	I	A	L	N	R	A	A	I	D	S	G	L	V	D	M	I	D	L	E	L	F	T	G	D	D	Q	V	K	E	T	V	A	Y	A	H	A	H	D	V	K	V	V	M	S	N	H	D	F	H	K	T	.
Query Conservation																																																																																	.
Alig confidence					.														.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.													.	.																					.	.	.	.		.
Template Conservation					.														.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.													.	.																					.	.	.	.
Template Sequence		A	E	F	.	G	I	P	V	I	T	D	V	H	E	P	H	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	Q	P	V	A	E	V	.	.	C	D	V	I	Q	L	P	A	F	L	A	R	.	.	Q	T	D	L	V	V	A	M	A	K	T	G	N	V	V	N	I	K	K	P	.	.	.	.	Q	F
Template Known Secondary structure					.										S				.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.		S						G	G	G	T	T	.	.																					.	.	.	.	T	T
Template Predicted Secondary structure					.														.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.													.	.																					.	.	.	.
Template SS confidence
		82	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.															.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.					.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.					.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.						.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.																																.	.	.	.	.
Query SS confidence																									.	.	.	.																																.	.	.	.	.
Query Sequence		P	E	A	E	E	I	I	A	R	L	R	K	M	Q	S	F	D	A	D	I	P	K	I	.	.	.	.	A	L	M	P	Q	S	T	S	D	V	L	T	L	L	A	A	T	L	E	M	Q	E	Q	Y	A	D	R	P	I	I	T	.	.	.	.	.	M	S	M	A	K	T	G	V	I	S	R	L	A	G	E	V	F
Query Conservation																									.	.	.	.																																.	.	.	.	.
Alig confidence																									.	.	.	.											.	.																				.	.	.	.	.
Template Conservation																																							.	.
Template Sequence		L	S	P	S	Q	M	K	N	I	V	E	K	F	H	E	A	G	N	G	K	L	I	L	C	E	R	G	S	S	F	G	Y	D	N	L	V	V	.	.	D	M	L	G	F	G	V	M	K	Q	T	C	G	N	L	P	V	I	F	D	V	T	H	S	L	G	R	R	A	Q	A	L	D	L	A	L	A	G	M	A	T
Template Known Secondary structure		S		G	G	G											T	T														S	S	S					.	.		T										T	T	T							T	T	T	T		S	S	G	G	G										T	T
Template Predicted Secondary structure																																							.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.			.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		220	.	.			.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		G	S	A	.	.	A	T	F	G	A	V	K	K	A	S	A	P	G	Q	I	S	V	N	D	L	R	T	V	L	T	I	L
Query Conservation					.	.
Alig confidence					.	.						.	.	.	.
Template Conservation												.	.	.	.
Template Sequence		R	L	A	G	L	F	L	E	S	H	.	.	.	.	P	D	P	S	A	L	P	L	H	L	L	E	D	F	L	I	R	I
Template Known Secondary structure				S								.	.	.	.					S			G	G	G
Template Predicted Secondary structure												.	.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.					.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions