Job Description P05194 Confidence 44.82% Date Thu Jan 5 10:58:42 GMT 2012 Rank 258 Aligned Residues 181 % Identity 15% Template c3ritE_ PDB info PDB header:isomerase Chain: E: PDB Molecule:dipeptide epimerase; PDBTitle: crystal structure of dipeptide epimerase from methylococcus capsulatus2 complexed with mg and dipeptide l-arg-d-lys Resolution 2.70 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		T	G	A	P	K	I	I	V	S	L	M	A	K	D	I	A	S	V	K	S	E	A	L	A	Y	R	E	A	D	F	D	I	L	E	W	R	V	D	H	Y	A	D	L	S	N	V	E	S	V	M	A	A	A	K	I	L	R	E	T	M	.	P	E	K	P	L	L	F	T	F	R	S	A	K	E	G	G	E	Q	A
Query Conservation																																																														.
Alig confidence																																									.	.	.	.	.																	.														.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.																															.	.	.	.	.	.
Template Sequence		H	D	S	L	P	T	S	V	T	I	G	I	K	P	V	E	E	T	L	A	E	A	R	E	H	L	A	L	G	F	R	V	L	K	V	K	L	C	G	.	.	.	.	.	D	E	E	Q	D	F	E	R	L	R	R	L	H	E	T	L	A	G	R	A	V	V	R	V	D	P	N	Q	S	Y	.	.	.	.	.	.
Template Known Secondary structure			S				B						S																T	T										S	.	.	.	.	.																S	S	S	S	S							T	T			.	.	.	.	.	.
Template Predicted Secondary structure																																									.	.	.	.	.																															.	.	.	.	.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.						.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140			.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.
Predicted Secondary structure																																																			.	.																										.
Query SS confidence																																																			.	.																										.
Query Sequence		I	S	T	E	A	Y	I	A	L	N	R	A	A	I	D	S	G	L	V	D	M	I	D	L	E	L	F	T	G	D	D	Q	V	K	E	T	V	A	Y	A	H	A	H	D	V	K	V	V	M	.	.	S	N	H	D	F	H	K	T	P	E	A	E	E	I	I	A	R	L	R	K	M	Q	S	F	D	.	A	D	I
Query Conservation																																																			.	.																										.
Alig confidence		.																	.				.	.																											.	.				.	.	.	.	.	.	.	.	.														.
Template Conservation		.																	.				.	.																																.	.	.	.	.	.	.	.	.
Template Sequence		.	D	R	D	G	L	L	R	L	D	R	L	V	Q	E	L	G	.	I	E	F	.	.	I	E	Q	P	F	P	A	G	R	T	D	W	L	R	A	L	P	K	A	I	R	R	R	I	A	A	D	E	S	L	L	.	.	.	.	.	.	.	.	.	G	P	A	D	A	F	A	L	A	A	P	P	A	A	C	G	I
Template Known Secondary structure		.																T	.				.	.					S		T	T							T	S							T				S	T	T			.	.	.	.	.	.	.	.	.	S									S	S	S		S		S
Template Predicted Secondary structure		.																	.				.	.																																.	.	.	.	.	.	.	.	.
Template SS confidence
			196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.			.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.										.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		169	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		P	K	I	A	L	M	P	Q	.	S	T	S	D	V	L	T	L	L	A	A	T	L	E	M	Q	E	Q	Y	A	D	R	P	I	I	T	M	S	M	A	K	T	G	V	I	S	R	L	A	G	E	V	F	G	S	A	A
Query Conservation										.
Alig confidence										.																.	.	.	.	.												.
Template Conservation																										.	.	.	.	.												.
Template Sequence		F	N	I	K	L	M	K	C	G	G	L	A	P	A	R	R	I	A	T	I	A	E	T	A	.	.	.	.	.	G	I	D	L	M	W	G	C	M	D	E	.	S	R	I	S	I	A	A	A	L	H	A	A	L	A	C
Template Known Secondary structure										T	S															.	.	.	.	.	T									S		.														T
Template Predicted Secondary structure																										.	.	.	.	.												.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.						.	.	.	290	.	.	.	.	.	.	.		.	.	300	.	.	.	.	.	.	.	.	.	310	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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