Job Description P05194 Confidence 96.90% Date Thu Jan 5 10:58:42 GMT 2012 Rank 35 Aligned Residues 221 % Identity 15% Template c3nvtA_ PDB info PDB header:transferase/isomerase Chain: A: PDB Molecule:3-deoxy-d-arabino-heptulosonate 7-phosphate synthase; PDBTitle: 1.95 angstrom crystal structure of a bifunctional 3-deoxy-7-2 phosphoheptulonate synthase/chorismate mutase (aroa) from listeria3 monocytogenes egd-e Resolution 1.95 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.								.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																	.																																										.	.	.	.	.	.	.
Query SS confidence																	.																																										.	.	.	.	.	.	.
Query Sequence		T	V	T	V	K	D	L	V	I	G	T	G	A	P	K	.	I	I	V	S	L	M	A	K	D	I	A	S	V	K	S	E	A	L	A	Y	R	E	A	D	F	D	I	L	E	W	R	V	D	H	Y	A	D	L	S	N	V	.	.	.	.	.	.	.	E	S	V	M	A	A	A	K	I	L	R	E	T	M	P	E
Query Conservation																	.																																										.	.	.	.	.	.	.
Alig confidence																	.																												.	.													.	.	.	.	.	.	.															.
Template Conservation																																													.	.																																		.
Template Sequence		I	V	T	V	K	G	L	P	I	G	N	G	E	P	V	F	V	F	G	P	C	S	V	E	S	Y	E	Q	V	A	A	V	A	E	S	I	K	A	K	G	L	K	L	.	.	I	R	G	G	A	F	K	P	R	T	S	P	Y	D	F	Q	G	L	G	L	E	G	L	K	I	L	K	R	V	S	D	E	Y	.	G
Template Known Secondary structure						T	T				T	S	S	S								S	B																	T	T				.	.				B	S	S				S	S	T	T	S					T															.	T
Template Predicted Secondary structure																																													.	.																																		.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.			.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		K	P	L	L	F	T	F	R	S	A	K	E	G	G	E	Q	A	I	S	T	E	A	Y	I	A	L	N	R	A	A	I	D	S	G	L	V	D	M	I	D	L	E	L	F	T	G	D	D	Q	V	K	E	T	V	A	Y	A	H	A	H	D	V	K	V	V	M	S	N	H	D	F	H	K	T	.	P	E	A	E	E
Query Conservation																																																																												.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.															.	.																				.	.	.	.		.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.															.	.																				.	.	.	.
Template Sequence		L	G	V	I	S	E	I	V	T	P	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	V	A	L	D	.	.	Y	V	D	V	I	Q	I	G	A	R	N	M	Q	N	.	.	F	E	L	L	K	A	A	G	R	V	D	K	P	I	L	L	K	R	G	.	.	.	.	L	S	A	T	I	E	E
Template Known Secondary structure										S	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	.	.	T		S						G	G	G	T	T		.	.									T	S	S	S								.	.	.	.	T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.															.	.																				.	.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.															.	.	.	.	.	200			.	.	.	.	.	.	.	.	.	210	.	.	.	.			.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.					.	.	.	.	.	.	240
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.					.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.				.	.	.			.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																				.	.	.	.																																	.	.	.				.	.
Query SS confidence																				.	.	.	.																																	.	.	.				.	.
Query Sequence		I	I	A	R	L	R	K	M	Q	S	F	D	A	D	I	P	K	I	.	.	.	.	A	L	M	P	Q	S	T	S	D	V	L	T	L	L	A	A	T	L	E	M	Q	E	Q	Y	A	D	R	P	I	I	T	M	.	.	.	S	M	A	.	.	K	T	G	V	I	S	R	L	A	G	E	V	F	G	S	A	A	T
Query Conservation																				.	.	.	.																																	.	.	.				.	.
Alig confidence																				.	.	.	.																									.								.	.	.				.	.
Template Conservation																																																.
Template Sequence		F	I	G	A	A	E	Y	I	M	S	Q	G	N	G	K	I	I	L	C	E	R	G	I	R	T	Y	E	K	A	T	R	N	T	L	D	I	S	A	V	P	I	L	K	K	E	T	.	H	L	P	V	M	V	D	V	T	H	S	T	G	R	K	D	L	L	L	P	C	A	K	A	A	L	A	I	E	A	D	G	V
Template Known Secondary structure											T	T	T											B			S			S	S	S	S	B			T	T									B	.	S	S													G	G	G											T	T		S
Template Predicted Secondary structure																																																.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		225	.	.	.	.	230	.	.							.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.
Query Sequence		F	G	A	V	K	K	A	S	.	.	.	.	.	.	A	P	G	Q	I	S	V	N	D	L	R	T	V	L	T	I	L
Query Conservation										.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.
Template Conservation
Template Sequence		M	A	E	V	H	P	D	P	A	V	A	L	S	D	S	A	Q	Q	M	D	I	P	E	F	E	E	F	W	N	A	I
Template Known Secondary structure					B		S		G	G	G		S	S		T	T	T	S	B
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions