Job Description P05194 Confidence 97.49% Date Thu Jan 5 10:58:42 GMT 2012 Rank 22 Aligned Residues 200 % Identity 14% Template c3k13A_ PDB info PDB header:transferase Chain: A: PDB Molecule:5-methyltetrahydrofolate-homocysteine methyltransferase; PDBTitle: structure of the pterin-binding domain metr of 5-2 methyltetrahydrofolate-homocysteine methyltransferase from3 bacteroides thetaiotaomicron Resolution 2.00 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																		.	.
Query SS confidence																																																		.	.
Query Sequence		V	T	V	K	D	L	V	I	G	T	G	A	P	K	I	I	V	S	L	M	A	K	D	I	A	S	V	K	S	E	A	L	A	Y	R	E	A	D	F	D	I	L	E	W	R	V	D	H	.	.	Y	A	D	L	S	N	V	E	S	V	M	A	A	A	K	I	L	R	E	T	M	P	E	K	P	L	L	F	T	F
Query Conservation																																																		.	.
Alig confidence																																																		.	.																						.							.	.
Template Conservation																																																																									.							.	.
Template Sequence		V	N	I	G	E	R	C	N	V	A	G	S	R	K	F	L	R	L	V	N	E	K	K	Y	D	E	A	L	S	I	A	R	Q	Q	V	E	D	G	A	L	V	I	D	V	N	X	D	D	G	L	L	D	A	R	T	E	X	T	T	F	L	N	L	I	X	S	E	P	E	I	A	.	R	V	P	V	X	I	.	.
Template Known Secondary structure										T	T	T										T	T															T	T		S									T	T	S															T						.	T	S					.	.
Template Predicted Secondary structure																																																																									.							.	.
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.		.	.	.	.	.	430
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.								.																																					.
Query SS confidence																											.	.								.																																					.
Query Sequence		R	S	A	K	E	G	G	E	Q	A	I	S	T	E	A	Y	I	A	L	N	R	A	A	I	D	.	.	S	G	L	V	D	M	I	.	D	L	E	L	F	T	G	D	D	Q	V	K	E	T	V	A	Y	A	H	A	H	D	V	K	V	V	M	S	N	H	D	F	H	K	T	P	.	E	A	E	E	I	I	A	R
Query Conservation																											.	.								.																																					.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.														.	.			.					.																																					.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	D	S	S	K	W	E	V	I	E	A	G	L	K	C	L	Q	G	.	K	S	I	V	N	S	I	S	L	K	E	G	E	E	V	F	L	E	H	A	R	I	I	K	Q	Y	G	A	A	T	V	V	X	A	F	D	E	K	G	Q	A	D	T	A	A	R	K	I	E	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.			S													S	S	.									S	T	T																T							S			T	T					S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																		.
Template SS confidence
														431	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.		.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.
		158	.	160						.	.	.	.	.	.	.	.	.	170	.	.	.	.	.											.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.						.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.																.	.	.	.	.	.	.	.	.	.																										.												.	.	.	.	.
Query SS confidence					.	.	.	.	.																.	.	.	.	.	.	.	.	.	.																										.												.	.	.	.	.
Query Sequence		L	R	K	.	.	.	.	.	M	Q	S	F	D	A	D	I	P	K	I	A	L	M	P	.	.	.	.	.	.	.	.	.	.	Q	S	T	S	D	V	L	T	L	L	A	A	T	L	E	M	Q	E	Q	Y	A	D	R	P	I	.	I	T	M	S	M	A	K	T	G	V	I	.	.	.	.	.	S	R	L	A	G
Query Conservation					.	.	.	.	.																.	.	.	.	.	.	.	.	.	.																										.												.	.	.	.	.
Alig confidence					.	.	.	.	.																.	.	.	.	.	.	.	.	.	.																										.												.	.	.	.	.
Template Conservation
Template Sequence		C	E	R	A	Y	R	L	L	V	D	K	V	G	F	N	P	H	D	I	I	F	D	P	N	V	L	A	V	A	T	G	I	E	E	H	N	N	Y	A	V	D	F	I	E	A	T	G	W	I	R	K	N	L	P	G	A	H	V	S	G	G	V	S	N	L	S	F	S	F	R	G	N	N	Y	I	R	E	A	X	H
Template Known Secondary structure													T				G	G	G											S	S	S		G	G	G	T	T																S	T	T						B	G	G	G	G	G	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		498	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.
		217	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		578	.	580

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions