Job Description P05194 Confidence 65.59% Date Thu Jan 5 10:58:42 GMT 2012 Rank 208 Aligned Residues 141 % Identity 21% Template c3fa4D_ PDB info PDB header:lyase Chain: D: PDB Molecule:2,3-dimethylmalate lyase; PDBTitle: crystal structure of 2,3-dimethylmalate lyase, a pep mutase/isocitrate2 lyase superfamily member, triclinic crystal form Resolution 2.18 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.								.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.
Query Sequence		D	L	S	N	V	E	S	V	M	A	A	A	K	I	L	R	E	T	M	P	E	K	P	L	L	F	T	F	R	S	A	K	E	G	G	E	Q	A	I	S	T	E	A	Y	I	A	L	N	R	A	A	I	D	S	G	L	V	D	M	I	D	L	E	.	.	.	.	.	.	.	L	F	T	G	D	D	Q	V	K	E
Query Conservation																																																																	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.							.	.																		.								.	.	.	.	.	.	.
Template Conservation																												.	.	.	.							.	.																		.
Template Sequence		G	I	C	T	L	N	D	M	R	A	N	A	E	M	I	S	N	I	S	P	S	T	P	V	I	A	.	.	.	.	D	A	D	T	G	Y	.	.	G	G	P	I	M	V	A	R	T	T	E	Q	Y	S	R	S	G	.	V	A	A	F	H	I	E	D	Q	V	Q	T	K	I	L	V	D	T	D	T	Y	V	T	R
Template Known Secondary structure		S																		S	T	T	S					.	.	.	.			T	T		S	.	.	S	S														T	T	.									B						B
Template Predicted Secondary structure																												.	.	.	.							.	.																		.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.					.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		127	.	.	130	.	.	.					.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure									.	.	.	.
Query SS confidence									.	.	.	.
Query Sequence		T	V	A	Y	A	H	A	.	.	.	.	H	D	V	K	V	V	M	S	N	H	D	F	H	K	T	P	E	A	E	E	I	I	A	R	L	R	K	M	Q	S	F	D	A	D	I	P	K	I	A	L	M	P	Q	S	T	S	D	V	L	T	L	L	A	A	T	L	E	M	Q	E	Q	Y	A	D	R	P	I	I	T
Query Conservation									.	.	.	.
Alig confidence									.	.	.	.																																							.																	.	.	.	.	.	.	.	.
Template Conservation																																																			.																	.	.	.	.	.	.	.	.
Template Sequence		I	R	A	A	V	Q	A	R	Q	R	I	G	S	D	I	V	V	I	A	R	T	D	S	L	Q	T	H	G	Y	E	E	S	V	A	R	L	R	A	A	R	D	A	G	A	D	V	G	F	L	.	E	G	I	T	S	R	E	M	A	R	Q	V	I	Q	D	L	.	.	.	.	.	.	.	.	A	G	W	P	L	L
Template Known Secondary structure													T																															T		S					.	T	T														T	.	.	.	.	.	.	.	.	T	T	S		B
Template Predicted Secondary structure																																																			.																	.	.	.	.	.	.	.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.									.	.	.	210	.	.
		203	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	M	A	K	T	G	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	N	M	V	E	H	G	A
Template Known Secondary structure						T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions