Job Description P05194 Confidence 59.26% Date Thu Jan 5 10:58:42 GMT 2012 Rank 225 Aligned Residues 165 % Identity 16% Template c3ez4B_ PDB info PDB header:transferase Chain: B: PDB Molecule:3-methyl-2-oxobutanoate hydroxymethyltransferase; PDBTitle: crystal structure of 3-methyl-2-oxobutanoate2 hydroxymethyltransferase from burkholderia pseudomallei Resolution 2.10 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.										.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.
Query Sequence		T	G	A	P	K	I	I	V	S	L	M	A	K	D	I	A	S	V	K	S	E	A	L	A	Y	R	E	A	D	F	D	I	L	E	W	R	V	D	H	Y	.	.	.	.	.	.	.	.	.	A	D	L	S	N	V	E	S	V	M	A	A	A	K	I	L	R	E	T	M	P	E	K	P	L	L	F	T	F	R	S
Query Conservation																																										.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.																.							.	.	.	.	.	.	.	.	.																					.								.	.	.
Template Conservation														.	.	.	.	.	.																.																																				.								.	.	.
Template Sequence		A	G	E	K	I	A	M	L	T	S	Y	D	.	.	.	.	.	.	A	S	F	A	A	L	L	D	R	A	N	V	D	V	Q	.	L	I	G	D	S	L	G	N	V	L	Q	G	Q	A	T	T	L	P	V	T	L	D	D	I	A	Y	H	T	A	C	V	A	R	A	Q	.	P	R	G	L	V	V	A	.	.	.
Template Known Secondary structure		T	T										S	.	.	.	.	.	.										T	T		S			.				T	T					T	T			S	S	S	T	T																T		.		S	S					.	.	.
Template Predicted Secondary structure														.	.	.	.	.	.																.																																				.								.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.							.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	E	G	G	E	Q	A	I	S	T	E	A	Y	I	A	L	N	R	A	A	I	D	S	G	L	V	D	M	I	D	L	E	L	F	T	G	D	D	Q	V	K	E	T	V	A	Y	A	H	A	H	D	V	K	V	V	M	S	N	H	D	F	H	K	T	P	E	A	E	E	I	I	A	R	L	R	K	M	Q	S
Query Conservation
Alig confidence										.																	.								.	.	.																								.	.	.					.	.
Template Conservation										.																	.								.	.	.																								.	.	.					.	.
Template Sequence		D	L	P	F	G	T	Y	G	.	T	P	A	D	A	F	A	S	A	V	K	L	M	R	A	G	.	A	Q	M	V	K	L	E	.	.	.	G	G	E	W	L	A	E	T	V	R	F	L	V	E	R	A	V	P	V	C	A	H	V	.	.	.	G	L	G	A	.	.	A	Q	L	L	R	D	A	R	A	V	E	E
Template Known Secondary structure					T	T	S		S	.	S														T	T	.		S						.	.	.			G	G	G										T	T								.	.	.					.	.
Template Predicted Secondary structure										.																	.								.	.	.																								.	.	.					.	.
Template SS confidence
		82	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.				.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.				.	.	.	.			140	.	.	.	.	.	.	.	.	.	150	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	A	D	I	P	K	I	A	L	M	P	Q	S	T	S	D	V	L	T	L	L	A	A	T	L	E	M	Q	E	Q	Y	A	D	R	P	I	I	T	M	S	M	A	K	T
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.												.
Template Conservation														.	.	.	.	.	.	.	.	.												.
Template Sequence		A	G	A	Q	L	I	V	L	E	A	V	P	.	.	.	.	.	.	.	.	.	T	L	V	A	A	E	V	T	R	E	L	.	S	I	P	T	I	G	I	G	A	G	A	E
Template Known Secondary structure			T		S						S			.	.	.	.	.	.	.	.	.												.	S	S						S	S		S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.												.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.										.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions