Job Description P05194 Confidence 77.74% Date Thu Jan 5 10:58:42 GMT 2012 Rank 173 Aligned Residues 138 % Identity 20% Template c3eooL_ PDB info PDB header:lyase Chain: L: PDB Molecule:methylisocitrate lyase; PDBTitle: 2.9a crystal structure of methyl-isocitrate lyase from2 burkholderia pseudomallei Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	L	S	N	V	E	S	V	M	A	A	A	K	I	L	R	E	T	M	P	E	K	P	L	L	F	T	F	R	S	A	K	E	G	G	E	Q	A	I	S	T	E	A	Y	I	A	L	N	R	A	A	I	D	S	G	L	V	D	M	I	D	L	E	L	F	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.							.	.	.	.							.	.																		.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.							.	.	.	.							.	.																		.
Template Sequence		G	I	S	T	M	D	D	V	L	V	D	A	N	R	I	T	N	A	T	.	N	L	P	L	L	V	.	.	.	.	D	I	D	T	G	W	.	.	G	G	A	F	N	I	A	R	T	I	R	S	F	I	K	A	G	.	V	G	A	V	H	L	E	D	Q	V	G	Q	K	R	C	G	H	R	P	G	K	E	C	V
Template Known Secondary structure		S																			.		S					.	.	.	.			T	T		S	.	.	S	S														T	T	.		S							B						T	T							B
Template Predicted Secondary structure																					.							.	.	.	.							.	.																		.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.					.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.				.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.
Query SS confidence																				.	.	.
Query Sequence		G	D	D	Q	V	K	E	T	V	A	Y	A	H	A	H	D	V	K	.	.	.	V	V	M	S	N	H	D	F	H	K	T	P	E	A	E	E	I	I	A	R	L	R	K	M	Q	S	F	D	A	D	I	P	K	I	A	L	M	P	Q	S	T	S	D	V	L	T	L	L	A	A	T	L	E	M	Q	E	Q	Y	A
Query Conservation																				.	.	.
Alig confidence																				.	.	.																																						.														.	.	.	.	.	.	.	.
Template Conservation																																																												.														.	.	.	.	.	.	.	.
Template Sequence		P	A	G	E	M	V	D	R	I	K	A	A	V	D	A	R	T	D	E	T	F	V	I	M	A	R	T	D	A	A	A	A	E	G	I	D	A	A	I	E	R	A	I	A	Y	V	E	A	G	A	D	M	I	F	P	E	A	M	.	K	T	L	D	D	Y	R	R	F	K	E	A	V	.	.	.	.	.	.	.	.
Template Known Secondary structure																		S		T	T	S																												T		S								.		S												.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																												.														.	.	.	.	.	.	.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	P	I	I	T	M	S	M	A	K	T	G
Query Conservation
Alig confidence							.
Template Conservation							.
Template Sequence		K	V	P	I	L	.	A	N	L	T	E	F	G
Template Known Secondary structure			S		B		.					T	T	S
Template Predicted Secondary structure							.
Template SS confidence
		206	.	.	.	210		.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions