Job Description P05194 Confidence 82.87% Date Thu Jan 5 10:58:42 GMT 2012 Rank 149 Aligned Residues 208 % Identity 12% Template c3bleA_ PDB info PDB header:transferase Chain: A: PDB Molecule:citramalate synthase from leptospira interrogans; PDBTitle: crystal structure of the catalytic domain of licms in2 complexed with malonate Resolution 2.00 Å

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		26	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		D	I	A	S	V	K	S	E	A	L	A	.	Y	R	E	A	D	F	D	I	L	E	W	R	V	D	H	Y	A	D	L	S	N	V	E	S	V	M	A	A	A	K	I	L	R	E	T	M	P	E	K	P	L	L	F	T	F	R	S	A	K	E	G	G	E	Q	A	I	S	T	E	A	Y	I	A	L	N	R	A	A
Query Conservation													.
Alig confidence													.														.																																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.																																					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	T	S	E	K	L	N	I	A	K	F	L	L	Q	K	L	N	V	D	R	V	E	I	A	S	.	A	R	V	S	K	G	E	L	E	T	V	Q	K	I	M	E	W	A	A	T	E	Q	L	T	E	R	I	E	I	L	G	F	V	D	G	N	.	.	.	.	.	.	.	.	.	.	.	.	K	T	V	D	W	I
Template Known Secondary structure																T	T			S							.	T	T	S		T	T															T	T		G	G	G							S	S	T	T	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																											.																																					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.													.	.	90	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.																.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Query Sequence		I	D	S	G	L	V	D	M	I	D	L	E	L	F	T	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Q	V	K	E	T	V	A	Y	A	H	A	H	D	V	K	V	V	M	S	N	H	D	F	H	K	.	.	T	P	E	A	E	E	I	I	A	R	L	R	K	M	Q	S	F	D	A	D
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Alig confidence						.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Template Conservation						.
Template Sequence		K	D	S	G	.	A	K	V	L	N	L	L	T	K	G	S	L	H	H	L	E	K	Q	L	G	K	T	P	K	E	F	F	T	D	V	S	F	V	I	E	Y	A	I	K	S	G	L	K	I	N	V	Y	L	E	D	W	S	N	G	F	R	N	S	P	D	Y	V	K	S	L	V	E	H	L	S	K	E	H	I	E
Template Known Secondary structure					T	.											S								T																					T	T									T																					T	S			S
Template Predicted Secondary structure						.
Template SS confidence
		94	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		168	.	170	.	.	.	.	.	.			.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.			210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure											.	.																																		.	.																				.
Query SS confidence											.	.																																		.	.																				.
Query Sequence		I	P	K	I	A	L	M	P	Q	.	.	S	T	S	D	V	L	T	L	L	A	A	T	L	E	M	Q	E	Q	Y	A	D	R	P	I	I	T	M	S	M	A	K	T	G	.	.	V	I	S	R	L	A	G	E	V	F	G	S	A	A	T	F	G	A	V	.	K	K	A	S	A	P	G	Q	I	S	V	N	D	L
Query Conservation											.	.																																		.	.																				.
Alig confidence											.	.													.	.	.																			.	.																				.
Template Conservation																									.	.	.
Template Sequence		R	I	F	L	P	D	T	L	G	V	L	S	P	E	E	T	F	Q	G	V	D	S	L	.	.	.	I	Q	K	Y	P	D	I	H	F	E	F	H	G	H	N	D	Y	D	L	S	V	A	N	S	L	Q	A	I	R	A	G	V	K	G	L	H	A	S	I	N	G	L	G	E	R	A	G	N	T	P	L	E	A	L
Template Known Secondary structure								T	T																.	.	.					T	T	S							B		T	T	S												T	T		S					B	G	G	G		S	S	T	T		B		B
Template Predicted Secondary structure																									.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.				.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	V	L	T	I	L	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	T	T	I	H	D	K	S
Template Known Secondary structure									S
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions