|   |
54 | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
120 |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
Query Sequence |   |
D | L | S | N | V | E | S | V | M | A | A | A | K | I | L | R | E | T | M | P | E | K | P | L | L | F | T | F | R | S | A | K | E | G | G | E | Q | A | I | S | T | E | A | Y | I | A | L | N | R | A | A | I | D | S | G | L | V | D | M | I | D | L | E | L | F | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|   |
|   |
|   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
Template Conservation |   |
  |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   | . |   |   |
|
|
|
| . | . | . | . |
|   |
|   |
|
| . | . |
|   |   |   |   |
|   |   |
|
|   |   |   |   |   |
|
| . |
|
|
|
|   |
|
|
|
|   |   |   |
|   |   |
|   |   |   |   |   |
|
|   |
Template Sequence |   |
A | L | I | T | L | S | E | F | V | E | Q | A | T | R | I | G | R | V | A | . |
R | L | P | V | I | A | . |
. |
. |
. |
D | A | D | H | G | Y | . |
. |
G | N | A | L | N | V | M | R | T | V | V | E | L | E | R | A | G | . |
I | A | A | L | T | I | E | D | T | L | L | P | A | Q | F | G | R | K | S | T | D | L | I | C |
Template Known Secondary structure |   |
S |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| . | S | S |
|  |  |  | . | . | . | . |  |
| T | T |
| S | . | . | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | . |
| S |  |  |  |  |  |
| B |
|
| S |
|
| T | T |
|
| S |
|
| B |
|
|
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|
|  |  |  |  | . | . | . | . |  |  |
|
|
|
| . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
63 | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | |
. | . | . | . | . | . | |
|
|
|
. | . | 90 | . | . | . | |
|
. | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | |
. | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . |
  |
  |   |
121 | . | . | . | . | . | . | . | . | 130 | . | . | . | |
|
|
|
. | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | D | Q | V | K | E | T | V | A | Y | A | H | A | . |
. |
. |
. |
H | D | V | K | V | V | M | S | N | H | D | F | H | K | T | P | E | A | E | E | I | I | A | R | L | R | K | M | Q | S | F | D | A | D | I | P | K | I | A | L | M | P | Q | S | T | S | D | V | L | T | L | L | A | A | T | L | E | M | Q | E | Q | Y | A |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |   | . | . | . | . |   |   |   |   |
|
|   |
|   |
|   |
|   |   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
Template Conservation |   |
  |
|   |   |   |   |
|
|   |
|
|   |   |
|
|   |   |   |
|   |   |
|   |
|
|
|
|
|   |   |   | . | . |
|   |
|
|
|
|   |
|
|   |
|
|   |
|
|
|
|
|   |
| . |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
| . | . | . | . | . | . | . | . |
Template Sequence |   |
V | E | E | G | V | G | K | I | R | A | A | L | E | A | R | V | D | P | A | L | T | I | I | A | R | T | N | A | E | L | I | . |
. |
D | V | D | A | V | I | Q | R | T | L | A | Y | Q | E | A | G | A | D | G | I | . |
C | L | V | G | V | R | D | F | A | H | L | E | A | I | A | E | H | L | . |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S | T | T | S |  |  |  |  |  |  |  | T | T | T | S | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  | . |  |  |  |
|
|
| S |  |  |  |  |  |  |  |  | T | T |
| . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  | . |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
135 | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | |
|
. | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | |
. | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | |
|
|
|
|
|
|
|
  |
  |   |
197 | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | |
. | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Query Sequence |   |
D | R | P | I | I | T | M | S | M | A | K | T | G | V | I | S | R | L | A | G | E | V | F | G | . |
S | A | A | T | F | G | A |
Query Conservation |   |
  |   |
|   |
|   |   |   |
|
|   |   |
|   |   |
|
|
|   |   |   |   |   |
| . |
|   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |   |
|   |   |   |   |
Template Sequence |   |
H | I | P | L | M | L | V | T | Y | G | N | P | Q | L | R | D | D | A | R | L | A | R | L | G | V | R | V | V | V | N | G | H |
Template Known Secondary structure |   |
| S |
|  |  |  |  |
| T | T |
| G | G | G |
|
|  |  |  |  |  |  | T | T |  |  |  |  |  |
|
| S |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
204 | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . |
  |