Job Description P05194 Confidence 96.13% Date Thu Jan 5 10:58:42 GMT 2012 Rank 57 Aligned Residues 90 % Identity 20% Template c3b0vD_ PDB info PDB header:oxidoreductase/rna Chain: D: PDB Molecule:trna-dihydrouridine synthase; PDBTitle: trna-dihydrouridine synthase from thermus thermophilus in complex with2 trna Resolution 3.51 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.															.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	I	V	S	L	M	A	K	D	I	A	S	V	K	S	E	A	L	A	Y	R	E	A	D	F	D	I	L	E	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	D	H	Y	A	D	L	S	N	V	E	S	V	M	A	A	A	K	I	L	R	E	T	M	P	E	K	P	L	L	F	T	F	R	S
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.																	.
Template Conservation																																																				.	.	.																	.
Template Sequence		I	A	L	Q	L	A	G	S	D	P	K	S	L	A	E	A	A	R	I	G	E	A	F	G	Y	D	E	I	N	L	N	L	G	C	P	S	E	K	A	Q	E	G	G	Y	G	A	C	L	L	L	.	.	.	D	L	A	R	V	R	E	I	L	K	A	X	G	E	A	V	.	R	V	P	V	T	V	K	X	R	L
Template Known Secondary structure									S															T	T		S										S							T		G	G	G	G	G	G	.	.	.														T	T		.	S	S								S
Template Predicted Secondary structure																																																				.	.	.																	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.				110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	E	G	G	E	Q	A	I	S	T	E	A	Y	I	A	L	N	R	A	A	I	D	S	G	L	V	D	M	I	D	L
Query Conservation
Alig confidence								.	.	.																	.
Template Conservation								.	.	.																	.
Template Sequence		G	L	E	G	K	E	.	.	.	T	Y	R	G	L	A	Q	S	V	E	A	X	A	E	A	G	.	V	K	V	F	V	V
Template Known Secondary structure			B	T	T			.	.	.															T	T	.
Template Predicted Secondary structure								.	.	.																	.
Template SS confidence
		136	.	.	.	140	.				.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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