Job Description P05194 Confidence 96.16% Date Thu Jan 5 10:58:42 GMT 2012 Rank 55 Aligned Residues 179 % Identity 20% Template c2vefB_ PDB info PDB header:transferase Chain: B: PDB Molecule:dihydropteroate synthase; PDBTitle: dihydropteroate synthase from streptococcus pneumoniae Resolution 1.8 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.					.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.
Query SS confidence																																							.	.	.	.
Query Sequence		G	T	G	A	P	K	I	I	V	S	L	M	A	K	D	I	A	S	V	K	S	E	A	L	A	Y	R	E	A	D	F	D	I	L	E	W	R	.	.	.	.	V	D	H	Y	A	D	L	S	N	V	E	S	V	M	A	A	A	K	I	L	R	E	T	M	P	E	K	P	L	L	F	T	F	R	S	A	K	E	G
Query Conservation																																							.	.	.	.
Alig confidence															.																								.	.	.	.					.	.	.																	.								.	.	.	.	.	.	.	.
Template Conservation															.																																.	.	.																	.								.	.	.	.	.	.	.	.
Template Sequence		N	H	A	K	T	V	I	C	G	I	I	N	V	.	T	L	E	Q	A	L	Q	Q	A	R	K	L	I	A	E	G	A	S	M	L	D	I	G	G	E	S	Y	V	E	I	E	.	.	.	E	E	I	Q	R	V	V	P	V	I	K	A	I	R	K	E	.	S	D	V	L	I	S	I	.	.	.	.	.	.	.	.
Template Known Secondary structure				S											.																T		S														.	.	.																	.								.	.	.	.	.	.	.	.
Template Predicted Secondary structure															.																																.	.	.																	.								.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																												.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	E	Q	A	I	S	T	E	A	Y	I	A	L	N	R	A	A	I	D	S	G	L	V	D	M	I	.	D	L	E	L	F	T	G	D	D	Q	V	K	E	T	V	A	Y	A	H	A	H	D	V	K	V	V	M	S	N	H	D	F	H	K	T	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																												.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																.					.																	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.																.																						.	.	.
Template Sequence		.	.	.	.	.	.	D	T	W	K	S	Q	V	A	E	A	A	L	A	A	G	.	A	D	L	V	N	D	I	T	G	L	M	G	D	E	K	M	P	H	V	V	A	.	.	.	E	A	R	A	Q	V	V	I	M	F	N	P	V	M	A	R	P	Q	H	P	S	S	L	I	F	P	H	F	G	F	T	E	E	E
Template Known Secondary structure		.	.	.	.	.	.			S											T	T	.							T	T	T	T		S		T	T							.	.	.			T														T	T		G	G	G	T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.																.																						.	.	.
Template SS confidence
								91	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.				.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
															151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.						.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	E	I	I	A	R	L	R	K	M	Q	S	F	D	A	D	I	P	K	I	A	L	M	P	.	.	.	.	.	Q	S	T	S	D	V	L	T	L	L	A	A	T	L	E	M	Q	E	Q	Y	A	D	R	P	I	I	T	M	S	M	A	K	T	G	V	I	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.																				.	.						.
Template Conservation																																																																.	.						.
Template Sequence		L	A	D	F	E	T	L	P	I	E	E	L	M	E	A	F	F	E	R	A	L	A	R	A	A	E	A	G	I	A	P	E	N	I	L	L	D	P	G	I	G	F	G	L	T	K	K	E	N	L	L	L	L	R	D	L	D	K	L	H	Q	K	.	.	G	Y	P	I	F	.	L	G	V	S	R	K	R	F	V	I
Template Known Secondary structure						T	T	S																					T			G	G	G							T	T	S	S												T						T	T	.	.	S	S		B		.				S	S
Template Predicted Secondary structure																																																																.	.						.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.			.	.	.	230	.		.	.	.	.	.	.	.	.	240	.
		213	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	I	L	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions