Job Description P05194 Confidence 61.37% Date Thu Jan 5 10:58:42 GMT 2012 Rank 216 Aligned Residues 186 % Identity 10% Template c2qjjC_ PDB info PDB header:lyase Chain: C: PDB Molecule:mandelate racemase/muconate lactonizing enzyme; PDBTitle: crystal structure of d-mannonate dehydratase from novosphingobium2 aromaticivorans Resolution 1.80 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.											.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.																		.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.																		.
Query Sequence		A	P	K	I	I	V	S	L	M	A	K	D	I	A	S	V	K	S	E	A	L	A	Y	R	E	A	D	F	D	I	L	E	W	R	V	D	H	Y	A	D	L	S	.	.	.	.	.	.	.	.	.	.	N	V	E	S	V	M	A	A	A	K	I	L	R	E	T	M	P	.	E	K	P	L	L	F	T	F	R	S
Query Conservation																																												.	.	.	.	.	.	.	.	.	.																		.
Alig confidence																																												.	.	.	.	.	.	.	.	.	.																		.
Template Conservation
Template Sequence		G	I	M	V	Y	G	H	A	N	G	S	D	I	A	E	T	V	E	A	V	G	H	Y	I	D	M	G	Y	K	A	I	R	A	Q	T	G	V	P	G	I	S	L	P	S	V	T	G	W	D	T	R	K	A	L	N	Y	V	P	K	L	F	E	E	L	R	K	T	Y	G	F	D	H	H	L	L	H	D	G	H	H
Template Known Secondary structure		S										S	S														T	T		S									T	T																T	T														S	S	S							T	T
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	E	G	G	E	Q	A	I	S	T	E	A	Y	I	A	L	N	R	A	A	I	D	S	G	L	V	D	M	I	D	L	E	L	F	T	G	D	D	Q	V	K	E	T	V	A	Y	A	H	A	H	D	V	K	V	V	M	S	N	H	D	F	H	K	T	P	E	A	E	E	I	I	A	R	L	R	K	M	Q	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.																			.				.	.																																				.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.																			.				.	.																																				.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	R	Y	T	P	Q	E	A	A	N	L	G	K	M	L	E	P	Y	Q	.	L	F	W	.	.	L	E	D	C	T	P	A	E	N	Q	E	A	F	R	L	V	R	Q	H	T	V	T	P	L	A	V	G	E	I	F	N	T	I	W	D	.	.	.	.	.	.	.	.	A	K	D	L	I	Q
Template Known Secondary structure		.	.	.	.	.	.	.		S													G	G	G		.		S		.	.			S		S			S	S	G	G	G	G									S						T	T			S	G	G	G	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure		.	.	.	.	.	.	.																			.				.	.																																				.	.	.	.	.	.	.	.
Template SS confidence
									214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.			.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.									270	.	.	.	.	.
		164	.		.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure				.												.
Query SS confidence				.												.
Query Sequence		F	D	.	A	D	I	P	K	I	A	L	M	P	Q	.	S	T	S	D	V	L	T	L	L	A	A	T	L	E	M	Q	E	Q	Y	A	D	R	P	I	I	T	M	S	M	A	K	T	G	V	I	S	R	L	A	G	E	V	F	G	S	A	A
Query Conservation				.												.
Alig confidence				.												.																.	.	.	.	.
Template Conservation																																.	.	.	.	.
Template Sequence		N	Q	L	I	D	Y	I	R	A	T	V	V	G	A	G	G	L	T	H	L	R	R	I	A	D	L	A	S	L	Y	.	.	.	.	.	Q	V	R	T	G	C	H	G	A	T	D	L	S	P	V	T	M	G	C	A	L	H	F	D	T	W	V
Template Known Secondary structure		T	T			S						T	T	T	T	T															T	.	.	.	.	.	T									T	T	S
Template Predicted Secondary structure																																.	.	.	.	.
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.						.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions