Job Description P05194 Confidence 60.09% Date Thu Jan 5 10:58:42 GMT 2012 Rank 221 Aligned Residues 173 % Identity 16% Template c2h9aB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:co dehydrogenase/acetyl-coa synthase, iron- PDBTitle: corrinoid iron-sulfur protein Resolution 1.90 Å

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		14	.	.	.	.	.	20	.	.	.	.																.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Query Sequence		G	A	P	K	I	I	V	S	L	M	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	D	I	A	S	V	K	S	E	A	L	A	Y	R	E	A	D	F	D	I	L	E	W	R	V	.	.	.	D	H	Y	A	D	L	S	N	V	E	S	V	M	A	A	A	K	I	L	R	E	T	M	P	E	K
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.																								.
Template Conservation																																																																															.
Template Sequence		N	P	P	R	F	A	L	E	V	F	D	T	P	P	T	D	W	P	D	I	L	V	E	P	F	K	D	V	I	N	D	P	V	A	W	A	K	K	C	V	E	Y	G	A	D	I	V	A	L	R	L	V	S	A	H	P	D	G	Q	N	R	S	G	A	E	L	A	E	V	C	K	A	V	A	D	A	I	.	D	V
Template Known Secondary structure		S										S	S			S	S							G	G	G	T	T	T	T	T												T	T		S							G	G	G		T	T	T	T																			.	S	S
Template Predicted Secondary structure																																																																															.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	L	F	T	F	R	S	A	K	E	G	G	E	Q	A	I	S	T	E	A	Y	I	A	L	N	R	A	A	I	D	S	G	L	V	D	M	I	D	L	E	L	F	T	G	D	D	Q	V	K	E	T	V	A	Y	A	H	A	H	D	V	K	V	V	M	S	N	H	D	F	H	K	T	P	E	A	E	E	I	I
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.														.																																		.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.														.																																		.	.	.	.	.
Template Sequence		P	L	M	I	I	G	C	G	V	E	E	.	.	.	.	.	.	.	.	.	K	D	A	E	I	F	P	V	I	G	E	A	L	.	S	G	R	N	C	L	L	S	S	A	T	K	D	N	Y	K	P	I	V	A	T	C	M	V	H	G	H	S	V	V	A	S	A	.	.	.	.	.	P	L	D	I	N	L	S	K
Template Known Secondary structure									S				.	.	.	.	.	.	.	.	.													T	.	T	T	S									T	T	T												T								.	.	.	.	.	S	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.														.																																		.	.	.	.	.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.										.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180						.	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.							.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.				.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																							.	.	.	.	.	.																	.	.	.
Query SS confidence																							.	.	.	.	.	.																	.	.	.
Query Sequence		A	R	L	R	K	M	Q	S	F	D	A	D	I	P	K	I	A	L	M	P	Q	.	.	.	.	.	.	S	T	S	D	V	L	T	L	L	A	A	T	L	E	M	Q	.	.	.	E	Q	Y	A	D	R	P	I	I	T
Query Conservation																							.	.	.	.	.	.																	.	.	.
Alig confidence																							.	.	.	.	.	.																	.	.	.
Template Conservation
Template Sequence		Q	L	N	I	M	I	M	E	M	N	L	A	P	N	R	I	I	M	D	P	L	I	G	A	L	G	Y	G	I	E	Y	S	Y	S	I	I	E	R	M	R	L	G	A	L	T	G	D	K	I	L	A	M	P	V	V	C
Template Known Secondary structure									T	T	T			G	G	G										T	T	T	T																	T	T		G	G	G		S		B
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions