Job Description P05194 Confidence 93.85% Date Thu Jan 5 10:58:42 GMT 2012 Rank 90 Aligned Residues 185 % Identity 13% Template c2h9aA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:carbon monoxide dehydrogenase corrinoid/iron- PDBTitle: corrinoid iron-sulfur protein Resolution 1.90 Å

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		6	.	.	.	10	.	.	.	.																						.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40											.	.	.	.	.	.	.	.	.	50	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Query Sequence		V	K	D	L	V	I	G	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	K	I	I	V	S	L	M	A	K	D	I	A	S	V	K	S	E	A	L	A	Y	R	E	A	.	.	.	.	.	.	.	.	.	.	D	F	D	I	L	E	W	R	V	D	H	Y	A	D
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.												.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		V	A	L	I	K	V	G	K	G	E	K	V	L	E	I	G	H	E	T	V	L	F	R	H	D	K	R	F	E	H	P	C	G	L	A	I	L	V	E	D	T	L	S	E	G	E	I	K	E	R	V	E	K	I	N	K	L	V	F	D	R	V	G	Q	M	H	S	V	N	L	V	A	L	K	G	S	S	.	.	.
Template Known Secondary structure		S						S		T	T	S										S	S	G	G	G	S				S										T	T	S														T						T	T													T	T	.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	N	V	E	S	V	M	A	A	A	K	I	L	R	E	T	M	P	E	K	P	L	L	F	T	F	R	S	A	K	E	G	G	E	Q	A	I	S	T	E	A	Y	I	A	L	N	R	A	A	I	D	S	G	L	V	D	M	I	D	L	E	L	F	T	G	D	D	Q	V	K	E	T	V	A	Y	A	H	A	H
Query Conservation
Alig confidence		.																		.									.	.	.	.	.	.	.	.	.	.	.																	.											.	.	.	.
Template Conservation		.																		.									.	.	.	.	.	.	.	.	.	.	.																	.											.	.	.	.
Template Sequence		.	Q	D	A	A	T	F	A	K	A	V	A	T	A	R	E	V	T	.	D	L	P	F	I	L	I	G	.	.	.	.	.	.	.	.	.	.	.	T	P	E	Q	L	A	A	A	L	E	T	E	G	A	N	N	.	P	L	L	Y	A	A	T	A	D	N	.	.	.	.	Y	E	Q	M	V	E	L	A	K	K	Y
Template Known Secondary structure		.																		.		S						S	.	.	.	.	.	.	.	.	.	.	.													G	G	G		.								T	T	T	.	.	.	.
Template Predicted Secondary structure		.																		.									.	.	.	.	.	.	.	.	.	.	.																	.											.	.	.	.
Template SS confidence
			138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.												.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.					.	190	.	.	.	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.							.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.
Query Sequence		D	V	K	V	V	M	S	N	H	D	F	H	K	T	P	E	A	E	E	I	I	A	R	L	R	K	M	Q	S	F	D	A	D	I	P	K	I	A	L	M	P	Q	S	.	.	.	.	.	.	T	S	D	V	L	T	L	L	A	A	T	L	E	M	Q	E	Q	Y	A	D	R	P	I	I	T	M	S	M	A	K	T
Query Conservation																																													.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.																						.	.									.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.																						.	.
Template Sequence		N	V	P	L	T	V	.	.	.	.	.	.	S	A	K	G	L	D	A	L	A	E	L	V	Q	K	I	T	A	L	G	Y	K	.	.	N	L	I	L	D	P	Q	P	E	N	I	S	E	G	L	F	Y	Q	T	Q	I	R	R	L	A	I	K	K	L	F	R	P	F	G	Y	P	T	I	A	F	A	L	D	E	N
Template Known Secondary structure		T						.	.	.	.	.	.			S	S														T	T			.	.									S	S																		S			G	G	G		S		B							S	S
Template Predicted Secondary structure								.	.	.	.	.	.																						.	.
Template SS confidence
		200	.	.	.	.	.							.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.			.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		209	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	I	S	R	L	A	G	E	V	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	Y	Q	A	V	M	E	A	S	V	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions